Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.56□□□□□ -1.68
LHX1P48742 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.56□□□□□ -1.68
LHX1P48742 BNIP3P27-201ENST00000599991 412 ntBASIC4.56□□□□□ -1.68
LHX1P48742 OR2BH1P-201ENST00000608850 864 ntBASIC4.56□□□□□ -1.68
LHX1P48742 AL138721.1-201ENST00000616756 179 ntBASIC4.56□□□□□ -1.68
LHX1P48742 AC078880.5-201ENST00000617845 421 ntBASIC4.56□□□□□ -1.68
LHX1P48742 MIR8059-201ENST00000620427 81 ntBASIC4.56□□□□□ -1.68
LHX1P48742 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.56□□□□□ -1.68
LHX1P48742 AP001005.3-201ENST00000622049 129 ntBASIC4.56□□□□□ -1.68
LHX1P48742 AL445363.3-201ENST00000623080 671 ntBASIC4.56□□□□□ -1.68
LHX1P48742 AP002967.1-201ENST00000624203 539 ntBASIC4.56□□□□□ -1.68
LHX1P48742 AC016717.3-201ENST00000624730 554 ntBASIC4.56□□□□□ -1.68
LHX1P48742 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.56□□□□□ -1.68
LHX1P48742 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.56□□□□□ -1.68
LHX1P48742 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LHX1P48742 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
LHX1P48742 AL133243.3-201ENST00000617415 3004 ntBASIC4.56□□□□□ -1.68
LHX1P48742 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LHX1P48742 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
LHX1P48742 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
LHX1P48742 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LHX1P48742 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.55□□□□□ -1.68
LHX1P48742 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LHX1P48742 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LHX1P48742 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LHX1P48742 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
LHX1P48742 RNA5SP28-201ENST00000363841 119 ntBASIC4.55□□□□□ -1.68
LHX1P48742 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
LHX1P48742 RNU6-317P-201ENST00000384031 107 ntBASIC4.55□□□□□ -1.68
LHX1P48742 RPS26P8-201ENST00000393490 348 ntBASIC4.55□□□□□ -1.68
LHX1P48742 AC233289.1-201ENST00000403700 508 ntBASIC4.55□□□□□ -1.68
LHX1P48742 HMGB3P31-201ENST00000413333 595 ntBASIC4.55□□□□□ -1.68
LHX1P48742 AC009302.1-201ENST00000417147 390 ntBASIC4.55□□□□□ -1.68
LHX1P48742 RPS24P8-201ENST00000431490 402 ntBASIC4.55□□□□□ -1.68
LHX1P48742 BTF3P10-201ENST00000433415 495 ntBASIC4.55□□□□□ -1.68
LHX1P48742 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.55□□□□□ -1.68
LHX1P48742 AL031663.1-201ENST00000437445 219 ntBASIC4.55□□□□□ -1.68
LHX1P48742 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.55□□□□□ -1.68
LHX1P48742 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.55□□□□□ -1.68
LHX1P48742 ELOCP10-201ENST00000440624 327 ntBASIC4.55□□□□□ -1.68
LHX1P48742 ARL4AP3-201ENST00000441452 574 ntBASIC4.55□□□□□ -1.68
LHX1P48742 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.55□□□□□ -1.68
LHX1P48742 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.55□□□□□ -1.68
LHX1P48742 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.55□□□□□ -1.68
LHX1P48742 AC093267.1-201ENST00000489176 961 ntBASIC4.55□□□□□ -1.68
LHX1P48742 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.55□□□□□ -1.68
LHX1P48742 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.55□□□□□ -1.68
LHX1P48742 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.55□□□□□ -1.68
LHX1P48742 NPM1P6-201ENST00000521088 871 ntBASIC4.55□□□□□ -1.68
LHX1P48742 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LHX1P48742 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.55□□□□□ -1.68
LHX1P48742 RN7SL176P-201ENST00000580352 264 ntBASIC4.55□□□□□ -1.68
LHX1P48742 SLC25A36P1-201ENST00000590111 465 ntBASIC4.55□□□□□ -1.68
LHX1P48742 AC133794.1-201ENST00000602731 914 ntBASIC4.55□□□□□ -1.68
LHX1P48742 AL161729.3-201ENST00000603533 673 ntBASIC4.55□□□□□ -1.68
LHX1P48742 ELOCP34-201ENST00000604436 327 ntBASIC4.55□□□□□ -1.68
LHX1P48742 AC092653.1-201ENST00000608509 531 ntBASIC4.55□□□□□ -1.68
LHX1P48742 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.55□□□□□ -1.68
LHX1P48742 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LHX1P48742 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LHX1P48742 AC019278.1-201ENST00000623516 479 ntBASIC4.55□□□□□ -1.68
LHX1P48742 AC093875.1-201ENST00000623688 504 ntBASIC4.55□□□□□ -1.68
LHX1P48742 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.55□□□□□ -1.68
LHX1P48742 AL592182.3-201ENST00000642132 3304 ntBASIC4.55□□□□□ -1.68
LHX1P48742 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.55□□□□□ -1.68
LHX1P48742 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.55□□□□□ -1.68
LHX1P48742 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.55□□□□□ -1.68
LHX1P48742 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LHX1P48742 LARP1BP1-201ENST00000506036 1359 ntBASIC4.54□□□□□ -1.68
LHX1P48742 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LHX1P48742 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LHX1P48742 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
LHX1P48742 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.54□□□□□ -1.68
LHX1P48742 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
LHX1P48742 RNA5SP27-201ENST00000363839 119 ntBASIC4.54□□□□□ -1.68
LHX1P48742 RNU6-98P-201ENST00000384173 107 ntBASIC4.54□□□□□ -1.68
LHX1P48742 SNORD66.1-201ENST00000391230 76 ntBASIC4.54□□□□□ -1.68
LHX1P48742 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LHX1P48742 RN7SKP182-201ENST00000410772 298 ntBASIC4.54□□□□□ -1.68
LHX1P48742 RN7SKP167-201ENST00000411047 285 ntBASIC4.54□□□□□ -1.68
LHX1P48742 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.54□□□□□ -1.68
LHX1P48742 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.54□□□□□ -1.68
LHX1P48742 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.54□□□□□ -1.68
LHX1P48742 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.54□□□□□ -1.68
LHX1P48742 CBX1P4-201ENST00000439415 457 ntBASIC4.54□□□□□ -1.68
LHX1P48742 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.54□□□□□ -1.68
LHX1P48742 RNF2P1-201ENST00000442955 1010 ntBASIC4.54□□□□□ -1.68
LHX1P48742 ARL5AP2-201ENST00000444698 533 ntBASIC4.54□□□□□ -1.68
LHX1P48742 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.54□□□□□ -1.68
LHX1P48742 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.54□□□□□ -1.68
LHX1P48742 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.54□□□□□ -1.68
LHX1P48742 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.54□□□□□ -1.68
LHX1P48742 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.54□□□□□ -1.68
LHX1P48742 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.54□□□□□ -1.68
LHX1P48742 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LHX1P48742 AC099522.1-202ENST00000514718 367 ntBASIC4.54□□□□□ -1.68
LHX1P48742 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.54□□□□□ -1.68
LHX1P48742 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.54□□□□□ -1.68
LHX1P48742 PHBP17-201ENST00000528576 541 ntBASIC4.54□□□□□ -1.68
LHX1P48742 MTND5P21-201ENST00000531961 522 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms