Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.51□□□□□ -1.69
SOX2P48431 MTND4P5-201ENST00000435821 1374 ntBASIC4.51□□□□□ -1.69
SOX2P48431 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SOX2P48431 AC134882.1-201ENST00000603738 1676 ntBASIC4.51□□□□□ -1.69
SOX2P48431 AC092079.1-201ENST00000558620 1985 ntBASIC4.51□□□□□ -1.69
SOX2P48431 BRAFP1-201ENST00000445336 2703 ntBASIC4.51□□□□□ -1.69
SOX2P48431 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.51□□□□□ -1.69
SOX2P48431 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.51□□□□□ -1.69
SOX2P48431 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SOX2P48431 LINC01355-201ENST00000566551 5444 ntBASIC4.51□□□□□ -1.69
SOX2P48431 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SOX2P48431 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SOX2P48431 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.5□□□□□ -1.69
SOX2P48431 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SOX2P48431 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SOX2P48431 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SOX2P48431 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SOX2P48431 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.5□□□□□ -1.69
SOX2P48431 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SOX2P48431 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.5□□□□□ -1.69
SOX2P48431 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SOX2P48431 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
SOX2P48431 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SOX2P48431 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SOX2P48431 RNU6-500P-201ENST00000362349 107 ntBASIC4.5□□□□□ -1.69
SOX2P48431 RN7SKP187-201ENST00000365536 330 ntBASIC4.5□□□□□ -1.69
SOX2P48431 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SOX2P48431 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SOX2P48431 Y_RNA.505-201ENST00000384489 102 ntBASIC4.5□□□□□ -1.69
SOX2P48431 SNORA26.8-201ENST00000391306 124 ntBASIC4.5□□□□□ -1.69
SOX2P48431 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SOX2P48431 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.5□□□□□ -1.69
SOX2P48431 AC068533.2-201ENST00000411872 306 ntBASIC4.5□□□□□ -1.69
SOX2P48431 AL390774.1-201ENST00000411924 246 ntBASIC4.5□□□□□ -1.69
SOX2P48431 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.5□□□□□ -1.69
SOX2P48431 AL136133.1-201ENST00000413694 376 ntBASIC4.5□□□□□ -1.69
SOX2P48431 AL031779.1-201ENST00000415663 330 ntBASIC4.5□□□□□ -1.69
SOX2P48431 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.5□□□□□ -1.69
SOX2P48431 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.5□□□□□ -1.69
SOX2P48431 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.5□□□□□ -1.69
SOX2P48431 AC009238.2-201ENST00000431026 355 ntBASIC4.5□□□□□ -1.69
SOX2P48431 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.5□□□□□ -1.69
SOX2P48431 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.5□□□□□ -1.69
SOX2P48431 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
SOX2P48431 AC002504.1-201ENST00000438281 691 ntBASIC4.5□□□□□ -1.69
SOX2P48431 AL138878.2-201ENST00000440581 1241 ntBASIC4.5□□□□□ -1.69
SOX2P48431 RPL36AP39-201ENST00000445859 318 ntBASIC4.5□□□□□ -1.69
SOX2P48431 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.5□□□□□ -1.69
SOX2P48431 AL354710.1-201ENST00000453641 246 ntBASIC4.5□□□□□ -1.69
SOX2P48431 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.5□□□□□ -1.69
SOX2P48431 SETP11-201ENST00000473027 690 ntBASIC4.5□□□□□ -1.69
SOX2P48431 AC072039.1-201ENST00000477611 581 ntBASIC4.5□□□□□ -1.69
SOX2P48431 HMGB3P16-201ENST00000508037 287 ntBASIC4.5□□□□□ -1.69
SOX2P48431 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SOX2P48431 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.5□□□□□ -1.69
SOX2P48431 RNU6-1261P-201ENST00000517194 104 ntBASIC4.5□□□□□ -1.69
SOX2P48431 AC106038.2-201ENST00000520706 568 ntBASIC4.5□□□□□ -1.69
SOX2P48431 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.5□□□□□ -1.69
SOX2P48431 HIGD1AP10-201ENST00000527837 282 ntBASIC4.5□□□□□ -1.69
SOX2P48431 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.5□□□□□ -1.69
SOX2P48431 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.5□□□□□ -1.69
SOX2P48431 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.5□□□□□ -1.69
SOX2P48431 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.5□□□□□ -1.69
SOX2P48431 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.5□□□□□ -1.69
SOX2P48431 AC012213.3-201ENST00000577199 777 ntBASIC4.5□□□□□ -1.69
SOX2P48431 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.5□□□□□ -1.69
SOX2P48431 AC011260.1-201ENST00000578420 472 ntBASIC4.5□□□□□ -1.69
SOX2P48431 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.5□□□□□ -1.69
SOX2P48431 AL096712.1-201ENST00000614561 159 ntBASIC4.5□□□□□ -1.69
SOX2P48431 AC008121.2-201ENST00000614647 523 ntBASIC4.5□□□□□ -1.69
SOX2P48431 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.5□□□□□ -1.69
SOX2P48431 AL031667.3-201ENST00000620124 655 ntBASIC4.5□□□□□ -1.69
SOX2P48431 AC015804.1-201ENST00000622935 435 ntBASIC4.5□□□□□ -1.69
SOX2P48431 CR392039.4-201ENST00000624968 501 ntBASIC4.5□□□□□ -1.69
SOX2P48431 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.5□□□□□ -1.69
SOX2P48431 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SOX2P48431 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SOX2P48431 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.5□□□□□ -1.69
SOX2P48431 AC009313.2-201ENST00000417893 1941 ntBASIC4.5□□□□□ -1.69
SOX2P48431 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
SOX2P48431 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
SOX2P48431 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SOX2P48431 AC092747.4-201ENST00000620519 1861 ntBASIC4.49□□□□□ -1.69
SOX2P48431 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.49□□□□□ -1.69
SOX2P48431 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.49□□□□□ -1.69
SOX2P48431 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SOX2P48431 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SOX2P48431 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SOX2P48431 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SOX2P48431 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SOX2P48431 AC023490.2-201ENST00000359859 470 ntBASIC4.49□□□□□ -1.69
SOX2P48431 RNU6-115P-201ENST00000364310 107 ntBASIC4.49□□□□□ -1.69
SOX2P48431 RNA5SP90-201ENST00000364801 99 ntBASIC4.49□□□□□ -1.69
SOX2P48431 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SOX2P48431 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SOX2P48431 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
SOX2P48431 RN7SKP240-201ENST00000410583 375 ntBASIC4.49□□□□□ -1.69
SOX2P48431 PIGPP2-201ENST00000411569 458 ntBASIC4.49□□□□□ -1.69
SOX2P48431 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.49□□□□□ -1.69
SOX2P48431 BMS1P17-202ENST00000416720 316 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms