Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
RXRBP28702 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.87□□□□□ -1.31
RXRBP28702 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RXRBP28702 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RXRBP28702 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
RXRBP28702 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RXRBP28702 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RXRBP28702 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RXRBP28702 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RXRBP28702 MIR208A-201ENST00000362287 71 ntBASIC6.87□□□□□ -1.31
RXRBP28702 RNU6-560P-201ENST00000364007 108 ntBASIC6.87□□□□□ -1.31
RXRBP28702 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RXRBP28702 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC6.87□□□□□ -1.31
RXRBP28702 UBTFL3-201ENST00000418934 1024 ntBASIC6.87□□□□□ -1.31
RXRBP28702 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC6.87□□□□□ -1.31
RXRBP28702 PAICSP7-201ENST00000419829 962 ntBASIC6.87□□□□□ -1.31
RXRBP28702 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.87□□□□□ -1.31
RXRBP28702 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC6.87□□□□□ -1.31
RXRBP28702 TXNP5-201ENST00000441043 315 ntBASIC6.87□□□□□ -1.31
RXRBP28702 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.87□□□□□ -1.31
RXRBP28702 AL358232.1-201ENST00000448030 501 ntBASIC6.87□□□□□ -1.31
RXRBP28702 CEACAMP6-201ENST00000452007 574 ntBASIC6.87□□□□□ -1.31
RXRBP28702 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.87□□□□□ -1.31
RXRBP28702 AC008837.2-201ENST00000513076 418 ntBASIC6.87□□□□□ -1.31
RXRBP28702 AP003080.1-202ENST00000526526 915 ntBASIC6.87□□□□□ -1.31
RXRBP28702 KCTD9P4-201ENST00000526766 1166 ntBASIC6.87□□□□□ -1.31
RXRBP28702 ARL6IP1P1-201ENST00000545836 610 ntBASIC6.87□□□□□ -1.31
RXRBP28702 AL049779.3-201ENST00000557141 606 ntBASIC6.87□□□□□ -1.31
RXRBP28702 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.87□□□□□ -1.31
RXRBP28702 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC6.87□□□□□ -1.31
RXRBP28702 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC6.87□□□□□ -1.31
RXRBP28702 MIR4298-201ENST00000584380 73 ntBASIC6.87□□□□□ -1.31
RXRBP28702 AC006130.2-201ENST00000586202 326 ntBASIC6.87□□□□□ -1.31
RXRBP28702 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC6.87□□□□□ -1.31
RXRBP28702 AC024220.1-201ENST00000603675 484 ntBASIC6.87□□□□□ -1.31
RXRBP28702 AC005191.1-201ENST00000603950 358 ntBASIC6.87□□□□□ -1.31
RXRBP28702 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC6.87□□□□□ -1.31
RXRBP28702 AL589743.7-201ENST00000612637 233 ntBASIC6.87□□□□□ -1.31
RXRBP28702 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC6.87□□□□□ -1.31
RXRBP28702 AP005264.7-201ENST00000625003 745 ntBASIC6.87□□□□□ -1.31
RXRBP28702 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
RXRBP28702 AC139426.3-201ENST00000605648 2059 ntBASIC6.87□□□□□ -1.31
RXRBP28702 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RXRBP28702 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RXRBP28702 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RXRBP28702 AP000756.2-201ENST00000624168 2567 ntBASIC6.87□□□□□ -1.31
RXRBP28702 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
RXRBP28702 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RXRBP28702 AL021877.2-201ENST00000624442 10684 ntBASIC6.87□□□□□ -1.31
RXRBP28702 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RXRBP28702 AC079298.1-201ENST00000625026 1619 ntBASIC6.87□□□□□ -1.31
RXRBP28702 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.86□□□□□ -1.31
RXRBP28702 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RXRBP28702 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.86□□□□□ -1.31
RXRBP28702 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.86□□□□□ -1.31
RXRBP28702 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RXRBP28702 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC6.86□□□□□ -1.31
RXRBP28702 AC010928.1-201ENST00000592477 1447 ntBASIC6.86□□□□□ -1.31
RXRBP28702 CASC19-280ENST00000642102 1351 ntBASIC6.86□□□□□ -1.31
RXRBP28702 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RXRBP28702 RNU6-353P-201ENST00000364266 108 ntBASIC6.86□□□□□ -1.31
RXRBP28702 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
RXRBP28702 RNU6-348P-201ENST00000384386 107 ntBASIC6.86□□□□□ -1.31
RXRBP28702 SNORD115-47-201ENST00000391226 86 ntBASIC6.86□□□□□ -1.31
RXRBP28702 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC6.86□□□□□ -1.31
RXRBP28702 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC6.86□□□□□ -1.31
RXRBP28702 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC6.86□□□□□ -1.31
RXRBP28702 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC6.86□□□□□ -1.31
RXRBP28702 AL451136.1-201ENST00000435399 325 ntBASIC6.86□□□□□ -1.31
RXRBP28702 RPL23AP76-201ENST00000441860 458 ntBASIC6.86□□□□□ -1.31
RXRBP28702 RN7SL165P-201ENST00000477476 291 ntBASIC6.86□□□□□ -1.31
RXRBP28702 RPL7P18-201ENST00000478965 734 ntBASIC6.86□□□□□ -1.31
RXRBP28702 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.86□□□□□ -1.31
RXRBP28702 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC6.86□□□□□ -1.31
RXRBP28702 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC6.86□□□□□ -1.31
RXRBP28702 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.86□□□□□ -1.31
RXRBP28702 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.86□□□□□ -1.31
RXRBP28702 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.86□□□□□ -1.31
RXRBP28702 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC6.86□□□□□ -1.31
RXRBP28702 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.86□□□□□ -1.31
RXRBP28702 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC6.86□□□□□ -1.31
RXRBP28702 OR5AL2P-201ENST00000532185 920 ntBASIC6.86□□□□□ -1.31
RXRBP28702 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RXRBP28702 NMNAT1P1-201ENST00000554095 876 ntBASIC6.86□□□□□ -1.31
RXRBP28702 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC6.86□□□□□ -1.31
RXRBP28702 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC6.86□□□□□ -1.31
RXRBP28702 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC6.86□□□□□ -1.31
RXRBP28702 MTCO3P13-201ENST00000577757 781 ntBASIC6.86□□□□□ -1.31
RXRBP28702 MIR3158-1-201ENST00000583596 81 ntBASIC6.86□□□□□ -1.31
RXRBP28702 RPL12P25-202ENST00000598100 674 ntBASIC6.86□□□□□ -1.31
RXRBP28702 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC6.86□□□□□ -1.31
RXRBP28702 AC105254.2-201ENST00000603636 436 ntBASIC6.86□□□□□ -1.31
RXRBP28702 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RXRBP28702 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RXRBP28702 AC000367.1-201ENST00000452711 1766 ntBASIC6.86□□□□□ -1.31
RXRBP28702 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.86□□□□□ -1.31
RXRBP28702 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
RXRBP28702 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RXRBP28702 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.86□□□□□ -1.31
RXRBP28702 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms