Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC090971.4-201ENST00000560291 1800 ntBASIC4.37□□□□□ -1.71
RAB40ALP0C0E4 AL049737.1-201ENST00000413920 1403 ntBASIC4.37□□□□□ -1.71
RAB40ALP0C0E4 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
RAB40ALP0C0E4 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.37□□□□□ -1.71
RAB40ALP0C0E4 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 MIR122-201ENST00000385044 85 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 RPL7P27-201ENST00000403775 720 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 AL592291.1-201ENST00000403830 352 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 AL512430.2-201ENST00000406786 339 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 U3.35-201ENST00000408405 208 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 RNU2-65P-201ENST00000410162 185 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 RNU6-77P-201ENST00000410554 91 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 MTND2P15-201ENST00000418575 892 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 CHIAP3-201ENST00000423668 1133 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 RPL7P4-203ENST00000430239 730 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 ELOCP11-201ENST00000436690 332 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 ARL4AP3-201ENST00000441452 574 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 ELOCP16-201ENST00000444494 332 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 BX248409.1-201ENST00000455497 255 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 RNU7-140P-201ENST00000459546 60 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 FTH1P2-201ENST00000466086 412 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 AC023050.1-201ENST00000498198 304 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 HMGB1P19-201ENST00000517578 577 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 AC118942.1-201ENST00000529674 1035 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 TOMM20P2-201ENST00000540082 421 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 FKBP1BP1-201ENST00000553366 325 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 ZNF971P-201ENST00000562068 1249 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 AC090948.2-201ENST00000607363 564 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 AC018754.1-201ENST00000607486 925 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 AL121873.1-201ENST00000616013 524 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 AL121594.5-201ENST00000631724 573 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 AC099654.9-201ENST00000637055 678 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 AL645568.2-201ENST00000432815 1337 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 AC092435.4-201ENST00000623012 4159 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 RAD17P1-201ENST00000418130 2042 ntBASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAB40ALP0C0E4 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 SNORA51.12-201ENST00000384448 134 ntBASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 RNU6-298P-201ENST00000390888 96 ntBASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 AL049693.1-201ENST00000402760 611 ntBASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 RNU4-25P-201ENST00000410569 230 ntBASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 AC004690.1-201ENST00000418216 328 ntBASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 AL356387.2-201ENST00000422272 243 ntBASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 AL031736.2-201ENST00000426573 787 ntBASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 RPL21P110-201ENST00000433345 446 ntBASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 AC092447.2-201ENST00000435487 669 ntBASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 AC073143.1-201ENST00000436316 395 ntBASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 MTND6P18-201ENST00000439477 513 ntBASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.35□□□□□ -1.71
RAB40ALP0C0E4 SCARNA10-201ENST00000459255 330 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms