Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC073387.2-201ENST00000604797 784 ntBASIC5.15□□□□□ -1.59
HDAC6Q9UBN7 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HDAC6Q9UBN7 AC234782.5-201ENST00000617723 324 ntBASIC5.15□□□□□ -1.59
HDAC6Q9UBN7 FRG1HP-204ENST00000617940 757 ntBASIC5.15□□□□□ -1.59
HDAC6Q9UBN7 AC073569.3-201ENST00000619055 682 ntBASIC5.15□□□□□ -1.59
HDAC6Q9UBN7 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.15□□□□□ -1.59
HDAC6Q9UBN7 AC011815.3-201ENST00000624194 473 ntBASIC5.15□□□□□ -1.59
HDAC6Q9UBN7 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.15□□□□□ -1.59
HDAC6Q9UBN7 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HDAC6Q9UBN7 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HDAC6Q9UBN7 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HDAC6Q9UBN7 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HDAC6Q9UBN7 SEC63P2-201ENST00000503863 1939 ntBASIC5.15□□□□□ -1.59
HDAC6Q9UBN7 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HDAC6Q9UBN7 AL359922.3-201ENST00000624779 1670 ntBASIC5.15□□□□□ -1.59
HDAC6Q9UBN7 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.15□□□□□ -1.59
HDAC6Q9UBN7 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 RNU5B-1-201ENST00000363286 116 ntBASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 RN7SKP227-201ENST00000364445 330 ntBASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 Z98745.1-201ENST00000402553 494 ntBASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 ARL4AP5-201ENST00000404372 599 ntBASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 CYCSP10-201ENST00000417973 294 ntBASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 AL590609.2-201ENST00000421430 368 ntBASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 AL356387.2-201ENST00000422272 243 ntBASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 AL035407.2-201ENST00000454090 378 ntBASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 SCARNA10-201ENST00000459255 330 ntBASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 RNU7-27P-201ENST00000459281 62 ntBASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 IGLVIV-65-201ENST00000517313 360 ntBASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 AL158211.1-201ENST00000566763 763 ntBASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 MIR4789-201ENST00000577469 82 ntBASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 AC069366.1-201ENST00000583159 838 ntBASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 MIR3138-201ENST00000585238 82 ntBASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 BNIP3P38-201ENST00000601117 544 ntBASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 AC090948.1-201ENST00000607464 549 ntBASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 AC131238.1-201ENST00000617135 328 ntBASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 HSPA8P17-201ENST00000427029 1382 ntBASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 GTF2H2B-203ENST00000508065 1432 ntBASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.14□□□□□ -1.59
HDAC6Q9UBN7 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 AL445487.1-201ENST00000415694 1580 ntBASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 AL450326.2-201ENST00000421913 1962 ntBASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 RNA5SP27-201ENST00000363839 119 ntBASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 U6.112-201ENST00000384129 70 ntBASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 MIR195-201ENST00000385194 87 ntBASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 MIR1193-201ENST00000408109 78 ntBASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 MTATP6P20-201ENST00000414147 562 ntBASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 USP12PY-201ENST00000427677 1064 ntBASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 AC000041.1-201ENST00000439655 175 ntBASIC5.13□□□□□ -1.59
HDAC6Q9UBN7 MTCO1P53-201ENST00000441633 699 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms