Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 AADACP1-206ENST00000561502 1193 ntBASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 MIR4700-201ENST00000578311 74 ntBASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 VN1R78P-201ENST00000597393 564 ntBASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 AC123786.2-201ENST00000603459 275 ntBASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 AC011453.2-201ENST00000603737 729 ntBASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 AC025811.1-201ENST00000604312 472 ntBASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 ELOCP34-201ENST00000604436 327 ntBASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 AL121890.2-201ENST00000617644 465 ntBASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 OR2L1P-202ENST00000641567 1023 ntBASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CHMP4CQ96CF2 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 AL355852.1-201ENST00000454081 1771 ntBASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 AL359922.3-201ENST00000624779 1670 ntBASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 HMGB1P5-201ENST00000255320 642 ntBASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 UBBP2-201ENST00000376781 231 ntBASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 AC119751.3-201ENST00000399720 670 ntBASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 ERHP2-201ENST00000402323 299 ntBASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 AL590084.1-201ENST00000407885 387 ntBASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 AC009965.2-201ENST00000425328 970 ntBASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 OR2B7P-201ENST00000429302 934 ntBASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 RPL34P6-201ENST00000432390 345 ntBASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 MTCO2P20-201ENST00000437339 673 ntBASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 ACTR3P2-201ENST00000439585 1257 ntBASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 AC091951.3-201ENST00000504093 246 ntBASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 AC009117.1-201ENST00000563948 554 ntBASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 MIR3912-201ENST00000577566 105 ntBASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 AC011487.3-201ENST00000593607 453 ntBASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 AL137072.1-201ENST00000603444 466 ntBASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 AC104687.2-201ENST00000604442 342 ntBASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 AC092106.3-201ENST00000611308 722 ntBASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 AC120349.3-201ENST00000624377 529 ntBASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 AC134882.1-201ENST00000603738 1676 ntBASIC5.85□□□□□ -1.47
CHMP4CQ96CF2 AC139713.2-215ENST00000641428 5037 ntBASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 AP000756.2-201ENST00000624168 2567 ntBASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 DDX18P5-201ENST00000534547 1306 ntBASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 BMS1P3-201ENST00000372011 932 ntBASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 RN7SKP216-201ENST00000411050 312 ntBASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 AC004074.1-201ENST00000421810 1063 ntBASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 PPIAP17-201ENST00000438507 471 ntBASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 NPM1P33-201ENST00000438918 872 ntBASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 AL691482.1-201ENST00000453255 87 ntBASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 RPS17P2-201ENST00000461663 408 ntBASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 AC008897.1-201ENST00000494006 347 ntBASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 MTATP6P15-201ENST00000527233 835 ntBASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 AP001317.1-201ENST00000531194 960 ntBASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.84□□□□□ -1.47
CHMP4CQ96CF2 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 155.5 ms