Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.03□□□□□ -1.44
SMC1BQ8NDV3 NBR2-204ENST00000587322 63 ntBASIC6.03□□□□□ -1.44
SMC1BQ8NDV3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC6.03□□□□□ -1.44
SMC1BQ8NDV3 AC006363.1-201ENST00000603806 463 ntBASIC6.03□□□□□ -1.44
SMC1BQ8NDV3 MIR7973-1-201ENST00000614683 76 ntBASIC6.03□□□□□ -1.44
SMC1BQ8NDV3 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SMC1BQ8NDV3 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SMC1BQ8NDV3 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SMC1BQ8NDV3 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.03□□□□□ -1.44
SMC1BQ8NDV3 AC004076.2-201ENST00000620532 3323 ntBASIC6.03□□□□□ -1.44
SMC1BQ8NDV3 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SMC1BQ8NDV3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC6.02□□□□□ -1.44
SMC1BQ8NDV3 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 MTND4P31-201ENST00000425607 1343 ntBASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 ZNF736P9Y-201ENST00000439586 1345 ntBASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 ECM1P2-201ENST00000503354 1577 ntBASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 RBPJP2-201ENST00000618187 1444 ntBASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 OR1L1-202ENST00000373686 1083 ntBASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 AC007435.1-201ENST00000421086 415 ntBASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 GTF2IP23-201ENST00000423746 351 ntBASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 HMGB1P16-201ENST00000447155 540 ntBASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 AC010350.1-201ENST00000504908 231 ntBASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 OR4A43P-201ENST00000532938 908 ntBASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 NDUFAF4P1-201ENST00000559425 519 ntBASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 AC122134.1-201ENST00000565664 1104 ntBASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 MIR4444-1-201ENST00000581696 74 ntBASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 AC090312.2-201ENST00000582687 378 ntBASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 AC022069.1-201ENST00000582910 658 ntBASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 MIR4444-2-201ENST00000584390 74 ntBASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 AC006130.2-201ENST00000586202 326 ntBASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 BNIP3P26-201ENST00000600827 554 ntBASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 AC122108.2-201ENST00000611946 526 ntBASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 AC121761.2-201ENST00000617300 689 ntBASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 AC046144.1-201ENST00000478559 1853 ntBASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 PROS2P-201ENST00000474651 1951 ntBASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SMC1BQ8NDV3 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 U3.10-201ENST00000364459 214 ntBASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 RNU6-225P-201ENST00000384613 103 ntBASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 RNU6-575P-201ENST00000411326 105 ntBASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 AC114814.2-201ENST00000419195 485 ntBASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 SEPT2P1-201ENST00000419651 180 ntBASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 USP9YP31-201ENST00000431405 881 ntBASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 RPL21P110-201ENST00000433345 446 ntBASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 USP9YP22-201ENST00000438971 294 ntBASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 MTCYBP34-201ENST00000439552 670 ntBASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 AL358232.1-201ENST00000448030 501 ntBASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 RN7SL188P-201ENST00000469842 285 ntBASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 MTCO1P49-201ENST00000523429 802 ntBASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms