Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AC092435.4-201ENST00000623012 4159 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 RNA5SP183-201ENST00000362452 119 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 RN7SKP104-201ENST00000362605 328 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 RNU1-85P-201ENST00000364127 164 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 SNORD116-23-201ENST00000384645 92 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 MIR143-201ENST00000385300 106 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 RNU1-77P-201ENST00000390868 162 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 VN1R12P-201ENST00000403778 876 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 RPL21P108-201ENST00000413857 481 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AC009237.10-201ENST00000414112 510 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 OR2X1P-201ENST00000421144 687 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 RPS3P2-201ENST00000421346 701 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 IGKV1OR9-1-201ENST00000424370 284 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AL451139.1-201ENST00000434718 346 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AC012075.1-201ENST00000436549 580 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AL645931.1-201ENST00000439737 410 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 TRBV26-201ENST00000456572 344 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AC097484.1-201ENST00000471148 389 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 RPL7P39-201ENST00000481157 744 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 HMGB1P38-201ENST00000490557 577 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AC108022.1-201ENST00000493466 478 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AC104971.1-201ENST00000495117 578 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 PFN1P8-201ENST00000497012 543 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AL136038.1-201ENST00000497246 351 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 APOBEC3AP1-201ENST00000511396 287 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 RNA5SP473-201ENST00000516402 125 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 RNU6-1028P-201ENST00000517164 93 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AC023632.1-201ENST00000518463 375 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AC090281.1-201ENST00000523019 276 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AC027544.3-201ENST00000535082 757 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AL049779.2-201ENST00000553847 315 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 ATP5J2P6-201ENST00000565203 266 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AC010928.3-201ENST00000587712 541 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AP003973.1-201ENST00000604639 691 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AC005084.1-201ENST00000605160 304 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 MIR6889-201ENST00000613185 59 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AL121873.1-201ENST00000616013 524 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AC019206.1-201ENST00000621938 425 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AC098679.5-201ENST00000624394 571 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AL356121.2-201ENST00000624715 780 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 AC026634.1-201ENST00000634369 198 ntBASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LINC01561Q8N1V8 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 HSPD1P14-201ENST00000432666 1618 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms