Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CD44P16070 RNU6-28P-201ENST00000362378 107 ntBASIC8.29□□□□□ -1.08
CD44P16070 MIR19A-201ENST00000384878 82 ntBASIC8.29□□□□□ -1.08
CD44P16070 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
CD44P16070 KRT18P52-201ENST00000404956 846 ntBASIC8.29□□□□□ -1.08
CD44P16070 RNU2-61P-201ENST00000411069 191 ntBASIC8.29□□□□□ -1.08
CD44P16070 EEF1A1P29-201ENST00000416082 1096 ntBASIC8.29□□□□□ -1.08
CD44P16070 AC007098.1-201ENST00000420122 367 ntBASIC8.29□□□□□ -1.08
CD44P16070 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC8.29□□□□□ -1.08
CD44P16070 FABP5P2-201ENST00000439042 408 ntBASIC8.29□□□□□ -1.08
CD44P16070 CICP10-201ENST00000439497 198 ntBASIC8.29□□□□□ -1.08
CD44P16070 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC8.29□□□□□ -1.08
CD44P16070 RN7SL55P-201ENST00000464534 297 ntBASIC8.29□□□□□ -1.08
CD44P16070 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
CD44P16070 AC015820.1-201ENST00000473882 321 ntBASIC8.29□□□□□ -1.08
CD44P16070 AC012123.2-201ENST00000485809 248 ntBASIC8.29□□□□□ -1.08
CD44P16070 AC018437.1-201ENST00000492214 406 ntBASIC8.29□□□□□ -1.08
CD44P16070 MRPL57P6-201ENST00000506570 309 ntBASIC8.29□□□□□ -1.08
CD44P16070 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC8.29□□□□□ -1.08
CD44P16070 AC074250.1-201ENST00000511117 192 ntBASIC8.29□□□□□ -1.08
CD44P16070 AC108043.1-201ENST00000512696 574 ntBASIC8.29□□□□□ -1.08
CD44P16070 SNX18P27-201ENST00000523611 779 ntBASIC8.29□□□□□ -1.08
CD44P16070 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC8.29□□□□□ -1.08
CD44P16070 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC8.29□□□□□ -1.08
CD44P16070 OLR1-209ENST00000543993 822 ntTSL 2 BASIC8.29□□□□□ -1.08
CD44P16070 AC008083.2-201ENST00000546707 476 ntBASIC8.29□□□□□ -1.08
CD44P16070 EEF1A1P17-201ENST00000547505 1275 ntBASIC8.29□□□□□ -1.08
CD44P16070 AC090751.1-201ENST00000566966 267 ntBASIC8.29□□□□□ -1.08
CD44P16070 AC068152.1-202ENST00000571901 808 ntTSL 3 BASIC8.29□□□□□ -1.08
CD44P16070 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC8.29□□□□□ -1.08
CD44P16070 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC8.29□□□□□ -1.08
CD44P16070 AC233280.20-201ENST00000637412 416 ntBASIC8.29□□□□□ -1.08
CD44P16070 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CD44P16070 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CD44P16070 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CD44P16070 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CD44P16070 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
CD44P16070 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CD44P16070 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CD44P16070 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CD44P16070 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC8.29□□□□□ -1.08
CD44P16070 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC8.29□□□□□ -1.08
CD44P16070 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CD44P16070 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
CD44P16070 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC8.29□□□□□ -1.08
CD44P16070 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC8.29□□□□□ -1.08
CD44P16070 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CD44P16070 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CD44P16070 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CD44P16070 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC8.28□□□□□ -1.08
CD44P16070 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
CD44P16070 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
CD44P16070 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
CD44P16070 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CD44P16070 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC8.28□□□□□ -1.08
CD44P16070 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
CD44P16070 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC8.28□□□□□ -1.08
CD44P16070 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CD44P16070 SELE-204ENST00000367776 3576 ntTSL 5 BASIC8.28□□□□□ -1.08
CD44P16070 SELE-205ENST00000367777 3576 ntTSL 5 BASIC8.28□□□□□ -1.08
CD44P16070 RN7SKP174-201ENST00000363803 330 ntBASIC8.28□□□□□ -1.08
CD44P16070 RNU6-188P-201ENST00000364207 107 ntBASIC8.28□□□□□ -1.08
CD44P16070 RN7SKP118-201ENST00000364331 330 ntBASIC8.28□□□□□ -1.08
CD44P16070 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CD44P16070 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC8.28□□□□□ -1.08
CD44P16070 AL161742.1-201ENST00000418154 584 ntBASIC8.28□□□□□ -1.08
CD44P16070 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC8.28□□□□□ -1.08
CD44P16070 MTND4LP9-201ENST00000427694 174 ntBASIC8.28□□□□□ -1.08
CD44P16070 RPL23AP19-201ENST00000436229 369 ntBASIC8.28□□□□□ -1.08
CD44P16070 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC8.28□□□□□ -1.08
CD44P16070 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC8.28□□□□□ -1.08
CD44P16070 AL357134.1-201ENST00000445848 426 ntBASIC8.28□□□□□ -1.08
CD44P16070 ISCUP1-201ENST00000454451 448 ntBASIC8.28□□□□□ -1.08
CD44P16070 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC8.28□□□□□ -1.08
CD44P16070 RPS15AP1-201ENST00000457423 391 ntBASIC8.28□□□□□ -1.08
CD44P16070 AC109454.1-201ENST00000471205 498 ntBASIC8.28□□□□□ -1.08
CD44P16070 AL161747.1-201ENST00000480068 358 ntBASIC8.28□□□□□ -1.08
CD44P16070 RN7SL332P-201ENST00000482163 254 ntBASIC8.28□□□□□ -1.08
CD44P16070 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC8.28□□□□□ -1.08
CD44P16070 RNY3P16-201ENST00000516338 101 ntBASIC8.28□□□□□ -1.08
CD44P16070 RANP3-201ENST00000530970 276 ntBASIC8.28□□□□□ -1.08
CD44P16070 AC125612.1-201ENST00000547580 377 ntBASIC8.28□□□□□ -1.08
CD44P16070 AC026458.1-201ENST00000564330 438 ntBASIC8.28□□□□□ -1.08
CD44P16070 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CD44P16070 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC8.28□□□□□ -1.08
CD44P16070 RN7SL14P-201ENST00000579715 298 ntBASIC8.28□□□□□ -1.08
CD44P16070 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC8.28□□□□□ -1.08
CD44P16070 AC007136.1-201ENST00000589141 199 ntBASIC8.28□□□□□ -1.08
CD44P16070 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC8.28□□□□□ -1.08
CD44P16070 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC8.28□□□□□ -1.08
CD44P16070 AC018737.1-201ENST00000603900 204 ntBASIC8.28□□□□□ -1.08
CD44P16070 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC8.28□□□□□ -1.08
CD44P16070 AC091768.1-201ENST00000609258 930 ntBASIC8.28□□□□□ -1.08
CD44P16070 MIR8089-201ENST00000620165 82 ntBASIC8.28□□□□□ -1.08
CD44P16070 RN7SL680P-201ENST00000620379 299 ntBASIC8.28□□□□□ -1.08
CD44P16070 MIR6723-201ENST00000621981 89 ntBASIC8.28□□□□□ -1.08
CD44P16070 AC008873.1-201ENST00000625051 138 ntBASIC8.28□□□□□ -1.08
CD44P16070 AC073488.9-201ENST00000631601 754 ntBASIC8.28□□□□□ -1.08
CD44P16070 AC073488.6-201ENST00000632293 754 ntBASIC8.28□□□□□ -1.08
CD44P16070 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms