Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 U3.30-201ENST00000391308 210 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AL590762.2-201ENST00000395798 571 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 RPS24P12-201ENST00000402084 394 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 HDGFP1-201ENST00000405943 252 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 HMGB1P13-201ENST00000406019 642 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 SPTLC1P2-201ENST00000407089 121 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AC013404.1-201ENST00000413068 249 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 CYCSP10-201ENST00000417973 294 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 RPS3AP37-201ENST00000419176 745 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AC004448.2-201ENST00000422360 586 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 GTF2IP2-201ENST00000424290 697 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 FO393419.3-201ENST00000428741 282 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AC005033.1-201ENST00000428904 813 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AC084290.1-201ENST00000434995 374 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 NANOGP2-201ENST00000435391 727 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 PRPF38AP2-201ENST00000438179 851 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AL589880.1-201ENST00000448271 287 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AC096992.1-201ENST00000459808 709 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 RPL23AP65-201ENST00000475608 468 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 RN7SL817P-201ENST00000480777 288 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 RPSAP50-201ENST00000481955 852 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AC108022.1-201ENST00000493466 478 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AC025164.1-201ENST00000496249 478 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 HPRT1P2-201ENST00000505250 544 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AC008837.1-201ENST00000511513 412 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 RNU1-6P-201ENST00000516290 144 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AC125612.1-201ENST00000547580 377 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 MTND3P13-201ENST00000574391 343 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AC022726.1-201ENST00000587475 207 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 PCNAP1-202ENST00000595299 752 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AC020910.3-201ENST00000603701 874 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AC087283.1-201ENST00000604029 1074 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AC025588.2-201ENST00000604851 466 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AC114878.2-201ENST00000604863 1251 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AC008966.2-201ENST00000606157 453 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AL121594.5-201ENST00000631724 573 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AC119674.1-212ENST00000641155 993 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 BX649567.1-201ENST00000642071 1134 ntBASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
MRPS28Q9Y2Q9 AL031119.1-201ENST00000404707 1879 ntBASIC4.03□□□□□ -1.77
MRPS28Q9Y2Q9 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
MRPS28Q9Y2Q9 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
MRPS28Q9Y2Q9 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 ZFRP1-201ENST00000457579 2970 ntBASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 RNA5SP305-201ENST00000362665 119 ntBASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 RN7SKP115-201ENST00000363177 317 ntBASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 RNU1-87P-201ENST00000363727 170 ntBASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 RNU6-353P-201ENST00000364266 108 ntBASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 RNU4-68P-201ENST00000364314 141 ntBASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 RNU6-304P-201ENST00000364855 107 ntBASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 AL136310.1-201ENST00000404926 654 ntBASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 HMGB3P18-201ENST00000406327 590 ntBASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 DPPA2P3-201ENST00000411853 655 ntBASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 TCEA1P4-201ENST00000415066 844 ntBASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 RPL23AP27-201ENST00000415161 451 ntBASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 AL356320.2-201ENST00000417263 507 ntBASIC4.02□□□□□ -1.77
MRPS28Q9Y2Q9 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms