Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 VN1R42P-201ENST00000424651 344 ntBASIC4.43□□□□□ -1.7
HACD3Q9P035 RPEP3-201ENST00000425462 676 ntBASIC4.43□□□□□ -1.7
HACD3Q9P035 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.43□□□□□ -1.7
HACD3Q9P035 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.43□□□□□ -1.7
HACD3Q9P035 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.43□□□□□ -1.7
HACD3Q9P035 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.43□□□□□ -1.7
HACD3Q9P035 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.43□□□□□ -1.7
HACD3Q9P035 RPL12P46-201ENST00000436610 195 ntBASIC4.43□□□□□ -1.7
HACD3Q9P035 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.43□□□□□ -1.7
HACD3Q9P035 UBE2V1P3-201ENST00000439651 417 ntBASIC4.43□□□□□ -1.7
HACD3Q9P035 AL158053.1-201ENST00000441503 453 ntBASIC4.43□□□□□ -1.7
HACD3Q9P035 MOB1AP2-201ENST00000446060 614 ntBASIC4.43□□□□□ -1.7
HACD3Q9P035 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.43□□□□□ -1.7
HACD3Q9P035 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.43□□□□□ -1.7
HACD3Q9P035 MTND2P28-201ENST00000457540 1044 ntBASIC4.43□□□□□ -1.7
HACD3Q9P035 RPL21P126-201ENST00000470049 478 ntBASIC4.43□□□□□ -1.7
HACD3Q9P035 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HACD3Q9P035 RNU6-334P-201ENST00000517072 102 ntBASIC4.43□□□□□ -1.7
HACD3Q9P035 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.43□□□□□ -1.7
HACD3Q9P035 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
HACD3Q9P035 IFITM8P-201ENST00000522529 394 ntBASIC4.43□□□□□ -1.7
HACD3Q9P035 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.43□□□□□ -1.7
HACD3Q9P035 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.43□□□□□ -1.7
HACD3Q9P035 AL049870.4-201ENST00000555741 486 ntBASIC4.43□□□□□ -1.7
HACD3Q9P035 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.43□□□□□ -1.7
HACD3Q9P035 AC090515.3-201ENST00000560431 315 ntBASIC4.43□□□□□ -1.7
HACD3Q9P035 AC008638.3-201ENST00000603341 463 ntBASIC4.43□□□□□ -1.7
HACD3Q9P035 AC005191.1-201ENST00000603950 358 ntBASIC4.43□□□□□ -1.7
HACD3Q9P035 Z98200.1-201ENST00000607298 470 ntBASIC4.43□□□□□ -1.7
HACD3Q9P035 RN7SL722P-201ENST00000617780 284 ntBASIC4.43□□□□□ -1.7
HACD3Q9P035 RN7SL565P-201ENST00000618246 284 ntBASIC4.43□□□□□ -1.7
HACD3Q9P035 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.43□□□□□ -1.7
HACD3Q9P035 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.43□□□□□ -1.7
HACD3Q9P035 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.43□□□□□ -1.7
HACD3Q9P035 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HACD3Q9P035 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.43□□□□□ -1.7
HACD3Q9P035 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HACD3Q9P035 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HACD3Q9P035 AL137100.1-201ENST00000556703 1620 ntBASIC4.43□□□□□ -1.7
HACD3Q9P035 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.43□□□□□ -1.7
HACD3Q9P035 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HACD3Q9P035 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.42□□□□□ -1.7
HACD3Q9P035 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HACD3Q9P035 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HACD3Q9P035 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.42□□□□□ -1.7
HACD3Q9P035 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HACD3Q9P035 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
HACD3Q9P035 RNU1-15P-201ENST00000353977 144 ntBASIC4.42□□□□□ -1.7
HACD3Q9P035 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HACD3Q9P035 HMGB1P10-201ENST00000395823 563 ntBASIC4.42□□□□□ -1.7
HACD3Q9P035 RNU6-603P-201ENST00000411403 107 ntBASIC4.42□□□□□ -1.7
HACD3Q9P035 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.42□□□□□ -1.7
HACD3Q9P035 RPS20P14-201ENST00000412545 360 ntBASIC4.42□□□□□ -1.7
HACD3Q9P035 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.42□□□□□ -1.7
HACD3Q9P035 AL158825.1-201ENST00000414735 521 ntBASIC4.42□□□□□ -1.7
HACD3Q9P035 AC048351.1-201ENST00000420064 602 ntBASIC4.42□□□□□ -1.7
HACD3Q9P035 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.42□□□□□ -1.7
HACD3Q9P035 USP9YP4-201ENST00000424401 1745 ntBASIC4.42□□□□□ -1.7
HACD3Q9P035 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.42□□□□□ -1.7
HACD3Q9P035 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.42□□□□□ -1.7
HACD3Q9P035 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.42□□□□□ -1.7
HACD3Q9P035 DHFRP3-201ENST00000455595 559 ntBASIC4.42□□□□□ -1.7
HACD3Q9P035 NDUFA12P1-201ENST00000455914 406 ntBASIC4.42□□□□□ -1.7
HACD3Q9P035 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HACD3Q9P035 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HACD3Q9P035 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.42□□□□□ -1.7
HACD3Q9P035 CIR1P1-201ENST00000524055 1133 ntBASIC4.42□□□□□ -1.7
HACD3Q9P035 C1DP5-201ENST00000525775 383 ntBASIC4.42□□□□□ -1.7
HACD3Q9P035 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.42□□□□□ -1.7
HACD3Q9P035 MTND5P21-201ENST00000531961 522 ntBASIC4.42□□□□□ -1.7
HACD3Q9P035 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.42□□□□□ -1.7
HACD3Q9P035 AC068446.3-201ENST00000555285 382 ntBASIC4.42□□□□□ -1.7
HACD3Q9P035 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.42□□□□□ -1.7
HACD3Q9P035 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.42□□□□□ -1.7
HACD3Q9P035 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.42□□□□□ -1.7
HACD3Q9P035 AL049844.2-201ENST00000604280 628 ntBASIC4.42□□□□□ -1.7
HACD3Q9P035 AC116447.1-201ENST00000613153 453 ntBASIC4.42□□□□□ -1.7
HACD3Q9P035 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.42□□□□□ -1.7
HACD3Q9P035 AP004607.9-201ENST00000618202 316 ntBASIC4.42□□□□□ -1.7
HACD3Q9P035 AP000346.3-201ENST00000622821 210 ntBASIC4.42□□□□□ -1.7
HACD3Q9P035 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HACD3Q9P035 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HACD3Q9P035 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.42□□□□□ -1.7
HACD3Q9P035 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.42□□□□□ -1.7
HACD3Q9P035 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
HACD3Q9P035 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HACD3Q9P035 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
HACD3Q9P035 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
HACD3Q9P035 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.41□□□□□ -1.7
HACD3Q9P035 AL133412.1-201ENST00000380194 2992 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HACD3Q9P035 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.41□□□□□ -1.7
HACD3Q9P035 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HACD3Q9P035 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.41□□□□□ -1.7
HACD3Q9P035 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.41□□□□□ -1.7
HACD3Q9P035 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HACD3Q9P035 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HACD3Q9P035 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HACD3Q9P035 AC067945.1-201ENST00000342609 618 ntBASIC4.41□□□□□ -1.7
HACD3Q9P035 RNU1-130P-201ENST00000363930 160 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms