Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC021205.1-201ENST00000468797 348 ntBASIC4□□□□□ -1.77
TREX1Q9NSU2 SEPT7P6-201ENST00000469999 1143 ntBASIC4□□□□□ -1.77
TREX1Q9NSU2 AC006463.2-201ENST00000473326 348 ntBASIC4□□□□□ -1.77
TREX1Q9NSU2 AC022336.1-201ENST00000475510 337 ntBASIC4□□□□□ -1.77
TREX1Q9NSU2 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4□□□□□ -1.77
TREX1Q9NSU2 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4□□□□□ -1.77
TREX1Q9NSU2 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4□□□□□ -1.77
TREX1Q9NSU2 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4□□□□□ -1.77
TREX1Q9NSU2 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4□□□□□ -1.77
TREX1Q9NSU2 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4□□□□□ -1.77
TREX1Q9NSU2 MIR3939-201ENST00000582614 106 ntBASIC4□□□□□ -1.77
TREX1Q9NSU2 AC069366.1-201ENST00000583159 838 ntBASIC4□□□□□ -1.77
TREX1Q9NSU2 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4□□□□□ -1.77
TREX1Q9NSU2 AC011477.5-201ENST00000586571 259 ntBASIC4□□□□□ -1.77
TREX1Q9NSU2 MRPS35P3-201ENST00000603189 709 ntBASIC4□□□□□ -1.77
TREX1Q9NSU2 AC034236.3-201ENST00000605999 461 ntBASIC4□□□□□ -1.77
TREX1Q9NSU2 AP003392.5-201ENST00000607857 415 ntBASIC4□□□□□ -1.77
TREX1Q9NSU2 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4□□□□□ -1.77
TREX1Q9NSU2 AC145207.9-201ENST00000623802 325 ntBASIC4□□□□□ -1.77
TREX1Q9NSU2 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4□□□□□ -1.77
TREX1Q9NSU2 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4□□□□□ -1.77
TREX1Q9NSU2 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4□□□□□ -1.77
TREX1Q9NSU2 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TREX1Q9NSU2 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4□□□□□ -1.77
TREX1Q9NSU2 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TREX1Q9NSU2 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
TREX1Q9NSU2 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TREX1Q9NSU2 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4□□□□□ -1.77
TREX1Q9NSU2 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4□□□□□ -1.77
TREX1Q9NSU2 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
TREX1Q9NSU2 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
TREX1Q9NSU2 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TREX1Q9NSU2 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.99□□□□□ -1.77
TREX1Q9NSU2 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TREX1Q9NSU2 UBE3AP2-201ENST00000429033 2259 ntBASIC3.99□□□□□ -1.77
TREX1Q9NSU2 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.99□□□□□ -1.77
TREX1Q9NSU2 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TREX1Q9NSU2 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.99□□□□□ -1.77
TREX1Q9NSU2 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.99□□□□□ -1.77
TREX1Q9NSU2 TRGV6-201ENST00000417928 299 ntBASIC3.99□□□□□ -1.77
TREX1Q9NSU2 FAR2P4-202ENST00000425399 584 ntBASIC3.99□□□□□ -1.77
TREX1Q9NSU2 OR5BE1P-201ENST00000425977 939 ntBASIC3.99□□□□□ -1.77
TREX1Q9NSU2 AC016712.1-201ENST00000431088 378 ntBASIC3.99□□□□□ -1.77
TREX1Q9NSU2 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.99□□□□□ -1.77
TREX1Q9NSU2 ATP5HP2-201ENST00000433885 485 ntBASIC3.99□□□□□ -1.77
TREX1Q9NSU2 AC096638.2-201ENST00000434965 711 ntBASIC3.99□□□□□ -1.77
TREX1Q9NSU2 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.99□□□□□ -1.77
TREX1Q9NSU2 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.99□□□□□ -1.77
TREX1Q9NSU2 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.99□□□□□ -1.77
TREX1Q9NSU2 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.99□□□□□ -1.77
TREX1Q9NSU2 AP000926.1-201ENST00000479573 241 ntBASIC3.99□□□□□ -1.77
TREX1Q9NSU2 AL132838.2-201ENST00000492041 314 ntBASIC3.99□□□□□ -1.77
TREX1Q9NSU2 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TREX1Q9NSU2 AC109458.1-201ENST00000508858 316 ntBASIC3.99□□□□□ -1.77
TREX1Q9NSU2 AC002456.2-201ENST00000509356 380 ntBASIC3.99□□□□□ -1.77
TREX1Q9NSU2 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.99□□□□□ -1.77
TREX1Q9NSU2 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.99□□□□□ -1.77
TREX1Q9NSU2 MRPL49P2-201ENST00000521066 465 ntBASIC3.99□□□□□ -1.77
TREX1Q9NSU2 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.99□□□□□ -1.77
TREX1Q9NSU2 YPEL5P3-201ENST00000547227 352 ntBASIC3.99□□□□□ -1.77
TREX1Q9NSU2 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.99□□□□□ -1.77
TREX1Q9NSU2 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.99□□□□□ -1.77
TREX1Q9NSU2 AC025884.1-201ENST00000556034 378 ntBASIC3.99□□□□□ -1.77
TREX1Q9NSU2 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.99□□□□□ -1.77
TREX1Q9NSU2 MIR4458-201ENST00000578872 75 ntBASIC3.99□□□□□ -1.77
TREX1Q9NSU2 MIR4512-201ENST00000583257 77 ntBASIC3.99□□□□□ -1.77
TREX1Q9NSU2 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.99□□□□□ -1.77
TREX1Q9NSU2 MLECP1-201ENST00000615893 709 ntBASIC3.99□□□□□ -1.77
TREX1Q9NSU2 AL645927.2-201ENST00000618350 349 ntBASIC3.99□□□□□ -1.77
TREX1Q9NSU2 AC010435.1-201ENST00000623353 1177 ntBASIC3.99□□□□□ -1.77
TREX1Q9NSU2 OR5BE1P-202ENST00000641168 1176 ntBASIC3.99□□□□□ -1.77
TREX1Q9NSU2 BDP1P-201ENST00000582658 1990 ntBASIC3.99□□□□□ -1.77
TREX1Q9NSU2 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.99□□□□□ -1.77
TREX1Q9NSU2 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TREX1Q9NSU2 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
TREX1Q9NSU2 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TREX1Q9NSU2 IPO8P1-201ENST00000455509 3109 ntBASIC3.99□□□□□ -1.77
TREX1Q9NSU2 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 RNA5SP130-201ENST00000364431 114 ntBASIC3.98□□□□□ -1.77
TREX1Q9NSU2 SNORA62.2-201ENST00000364672 152 ntBASIC3.98□□□□□ -1.77
TREX1Q9NSU2 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 AMZ2P2-201ENST00000406819 1057 ntBASIC3.98□□□□□ -1.77
TREX1Q9NSU2 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 FTH1P6-201ENST00000430768 320 ntBASIC3.98□□□□□ -1.77
TREX1Q9NSU2 AC087650.1-201ENST00000431445 468 ntBASIC3.98□□□□□ -1.77
TREX1Q9NSU2 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 HMGB1P37-201ENST00000439613 609 ntBASIC3.98□□□□□ -1.77
TREX1Q9NSU2 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.98□□□□□ -1.77
TREX1Q9NSU2 AC010618.1-201ENST00000469924 477 ntBASIC3.98□□□□□ -1.77
TREX1Q9NSU2 RN7SL860P-201ENST00000473738 223 ntBASIC3.98□□□□□ -1.77
TREX1Q9NSU2 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms