Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC017015.1-201ENST00000477387 286 ntBASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 MTCYBP18-201ENST00000501056 747 ntBASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 IGKV2-19-201ENST00000518132 283 ntBASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 AL133338.2-201ENST00000604292 736 ntBASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 AC110994.2-201ENST00000635481 492 ntBASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 AC006378.2-201ENST00000623178 2476 ntBASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 PARP4P2-201ENST00000446672 3326 ntBASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 FARSBP1-201ENST00000435808 1778 ntBASIC5.6□□□□□ -1.51
PTCHD1Q96NR3 THAP12P9-201ENST00000503971 2360 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AC027088.4-201ENST00000611559 1947 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 Y_RNA.89-201ENST00000363031 102 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 RN7SKP128-201ENST00000364270 303 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 RNU6-534P-201ENST00000364877 106 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AL121835.1-201ENST00000404250 354 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 RNU2-28P-201ENST00000410457 189 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 Y_RNA.608-201ENST00000410647 95 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 HMGN1P20-201ENST00000411849 300 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 BX284632.2-201ENST00000421091 399 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AC233981.1-201ENST00000423224 461 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AC099677.3-201ENST00000427081 395 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AL445928.1-201ENST00000435545 222 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 LSM1P1-201ENST00000438629 273 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 RPS7P3-201ENST00000443360 580 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AL359955.2-201ENST00000445380 353 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 GEMIN2P1-201ENST00000454246 752 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 HLA-DPA3-207ENST00000454398 229 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AL122020.1-201ENST00000472287 459 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 OR52A4P-201ENST00000472867 958 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AL035690.1-201ENST00000490892 383 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AC105914.1-201ENST00000511798 226 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AC114781.3-201ENST00000512083 142 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AC026412.2-201ENST00000512270 1075 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AC060775.1-201ENST00000518241 520 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 PCNAP4-201ENST00000532690 730 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AC090502.2-201ENST00000549267 280 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 RPL21P5-201ENST00000554662 472 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AL157687.1-201ENST00000554853 619 ntBASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC5.59□□□□□ -1.51
PTCHD1Q96NR3 AL133457.1-201ENST00000564251 987 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms