Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 MTND6P13-201ENST00000443510 523 ntBASIC7.31□□□□□ -1.24
TRIM47Q96LD4 RPL12P20-201ENST00000475538 479 ntBASIC7.31□□□□□ -1.24
TRIM47Q96LD4 AL136038.1-201ENST00000497246 351 ntBASIC7.31□□□□□ -1.24
TRIM47Q96LD4 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 RNU6-1225P-201ENST00000516336 65 ntBASIC7.31□□□□□ -1.24
TRIM47Q96LD4 IGKV2-19-201ENST00000518132 283 ntBASIC7.31□□□□□ -1.24
TRIM47Q96LD4 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 IGHV4-55-201ENST00000520889 368 ntBASIC7.31□□□□□ -1.24
TRIM47Q96LD4 COPS8P3-201ENST00000526024 482 ntBASIC7.31□□□□□ -1.24
TRIM47Q96LD4 OR6M2P-201ENST00000529831 871 ntBASIC7.31□□□□□ -1.24
TRIM47Q96LD4 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 AC034105.3-201ENST00000565294 442 ntBASIC7.31□□□□□ -1.24
TRIM47Q96LD4 MIR4301-201ENST00000577203 66 ntBASIC7.31□□□□□ -1.24
TRIM47Q96LD4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 AC016727.2-201ENST00000603988 621 ntBASIC7.31□□□□□ -1.24
TRIM47Q96LD4 AL359854.1-201ENST00000614203 1594 ntBASIC7.31□□□□□ -1.24
TRIM47Q96LD4 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.31□□□□□ -1.24
TRIM47Q96LD4 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 AC069234.4-201ENST00000621276 412 ntBASIC7.31□□□□□ -1.24
TRIM47Q96LD4 MIR6719-201ENST00000622428 87 ntBASIC7.31□□□□□ -1.24
TRIM47Q96LD4 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 NSRP1P1-201ENST00000444067 1693 ntBASIC7.31□□□□□ -1.24
TRIM47Q96LD4 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
TRIM47Q96LD4 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM47Q96LD4 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM47Q96LD4 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.3□□□□□ -1.24
TRIM47Q96LD4 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM47Q96LD4 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC7.3□□□□□ -1.24
TRIM47Q96LD4 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM47Q96LD4 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM47Q96LD4 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM47Q96LD4 TMSB4XP2-201ENST00000335179 210 ntBASIC7.3□□□□□ -1.24
TRIM47Q96LD4 RNY4P36-201ENST00000391116 96 ntBASIC7.3□□□□□ -1.24
TRIM47Q96LD4 ELOCP4-201ENST00000420090 333 ntBASIC7.3□□□□□ -1.24
TRIM47Q96LD4 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC7.3□□□□□ -1.24
TRIM47Q96LD4 RPL36AP53-201ENST00000432891 316 ntBASIC7.3□□□□□ -1.24
TRIM47Q96LD4 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.3□□□□□ -1.24
TRIM47Q96LD4 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC7.3□□□□□ -1.24
TRIM47Q96LD4 RPL32P28-201ENST00000443577 397 ntBASIC7.3□□□□□ -1.24
TRIM47Q96LD4 SBDSP1-204ENST00000453858 737 ntBASIC7.3□□□□□ -1.24
TRIM47Q96LD4 TRBV1-201ENST00000476502 284 ntBASIC7.3□□□□□ -1.24
TRIM47Q96LD4 RPL34P33-201ENST00000486062 334 ntBASIC7.3□□□□□ -1.24
TRIM47Q96LD4 AC022415.1-202ENST00000486612 523 ntBASIC7.3□□□□□ -1.24
TRIM47Q96LD4 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM47Q96LD4 AC024558.1-201ENST00000505008 528 ntBASIC7.3□□□□□ -1.24
TRIM47Q96LD4 AC108064.1-201ENST00000513791 460 ntBASIC7.3□□□□□ -1.24
TRIM47Q96LD4 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.3□□□□□ -1.24
TRIM47Q96LD4 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC7.3□□□□□ -1.24
TRIM47Q96LD4 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.3□□□□□ -1.24
TRIM47Q96LD4 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.3□□□□□ -1.24
TRIM47Q96LD4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC7.3□□□□□ -1.24
TRIM47Q96LD4 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.3□□□□□ -1.24
TRIM47Q96LD4 OR7E18P-201ENST00000592589 702 ntBASIC7.3□□□□□ -1.24
TRIM47Q96LD4 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM47Q96LD4 DISC2.1-201ENST00000612827 205 ntBASIC7.3□□□□□ -1.24
TRIM47Q96LD4 AC099494.2-201ENST00000623371 978 ntBASIC7.3□□□□□ -1.24
TRIM47Q96LD4 AC073488.3-201ENST00000631611 778 ntBASIC7.3□□□□□ -1.24
TRIM47Q96LD4 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM47Q96LD4 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM47Q96LD4 AL031985.3-201ENST00000565390 2449 ntBASIC7.3□□□□□ -1.24
TRIM47Q96LD4 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM47Q96LD4 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.3□□□□□ -1.24
TRIM47Q96LD4 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM47Q96LD4 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM47Q96LD4 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM47Q96LD4 UGT2B24P-201ENST00000514441 1597 ntBASIC7.29□□□□□ -1.24
TRIM47Q96LD4 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM47Q96LD4 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM47Q96LD4 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM47Q96LD4 AC022034.1-201ENST00000512867 2156 ntBASIC7.29□□□□□ -1.24
TRIM47Q96LD4 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM47Q96LD4 AC062022.1-201ENST00000451026 1684 ntBASIC7.29□□□□□ -1.24
TRIM47Q96LD4 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM47Q96LD4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC7.29□□□□□ -1.24
TRIM47Q96LD4 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC7.29□□□□□ -1.24
TRIM47Q96LD4 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM47Q96LD4 RNU6-543P-201ENST00000362576 108 ntBASIC7.29□□□□□ -1.24
TRIM47Q96LD4 Y_RNA.135-201ENST00000363439 95 ntBASIC7.29□□□□□ -1.24
TRIM47Q96LD4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
TRIM47Q96LD4 RNU6-1148P-201ENST00000410992 104 ntBASIC7.29□□□□□ -1.24
TRIM47Q96LD4 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC7.29□□□□□ -1.24
TRIM47Q96LD4 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM47Q96LD4 RAD23BP1-201ENST00000421404 1227 ntBASIC7.29□□□□□ -1.24
TRIM47Q96LD4 AC130360.1-201ENST00000425489 1117 ntBASIC7.29□□□□□ -1.24
TRIM47Q96LD4 MTCO1P54-201ENST00000430139 712 ntBASIC7.29□□□□□ -1.24
TRIM47Q96LD4 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC7.29□□□□□ -1.24
TRIM47Q96LD4 AL513175.1-201ENST00000431492 780 ntBASIC7.29□□□□□ -1.24
TRIM47Q96LD4 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC7.29□□□□□ -1.24
TRIM47Q96LD4 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.29□□□□□ -1.24
TRIM47Q96LD4 RPL36AP39-201ENST00000445859 318 ntBASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms