Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 RN7SL271P-201ENST00000487601 295 ntBASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 IGKV2D-23-201ENST00000518179 286 ntBASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 CYCSP29-201ENST00000533731 318 ntBASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 TOMM20P2-201ENST00000540082 421 ntBASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 MIR3939-201ENST00000582614 106 ntBASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 MIR7151-201ENST00000617477 60 ntBASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 AC095038.2-201ENST00000621464 1070 ntBASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 AC015722.2-201ENST00000622210 551 ntBASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 AC010608.2-201ENST00000624830 470 ntBASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 OR11H4-201ENST00000315409 1082 ntBASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 SNORD74.4-201ENST00000364129 80 ntBASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 RNU11-4P-201ENST00000391149 133 ntBASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 VDAC1P6-201ENST00000430062 855 ntBASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 AC022022.1-201ENST00000430304 178 ntBASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 Z85994.2-201ENST00000434327 452 ntBASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 RPS4XP4-201ENST00000443195 763 ntBASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 AC092691.2-201ENST00000461787 803 ntBASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 MTND1P6-201ENST00000523621 946 ntBASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 AC092851.1-201ENST00000535964 478 ntBASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 AC027281.1-201ENST00000574178 758 ntBASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 AC009452.1-201ENST00000640823 606 ntBASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 MTCO1P14-201ENST00000441695 1559 ntBASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
CCDC65Q8IXS2 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 FAM3C2-201ENST00000312214 681 ntBASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 RNU6-891P-201ENST00000384280 111 ntBASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 MT-RNR1-201ENST00000389680 954 ntBASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 AC240504.1-201ENST00000395709 845 ntBASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 AMZ2P2-201ENST00000406819 1057 ntBASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 SNORA3C-201ENST00000408792 125 ntBASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 AC016397.1-201ENST00000412463 242 ntBASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 HSPE1P12-201ENST00000412576 301 ntBASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 MTCO1P54-201ENST00000430139 712 ntBASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 EXTL2P1-201ENST00000446218 416 ntBASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 RPL7AP52-201ENST00000458096 790 ntBASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 HMGN1P8-201ENST00000463578 288 ntBASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 LARP7P4-201ENST00000481075 878 ntBASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 SYT14P1-201ENST00000481459 721 ntBASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 AC138701.1-201ENST00000524329 714 ntBASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 AF230666.2-201ENST00000602328 725 ntBASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 MIR6748-201ENST00000610433 71 ntBASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 AC005962.2-201ENST00000611427 652 ntBASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 AL391597.1-201ENST00000618707 694 ntBASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 AL773545.4-201ENST00000637262 310 ntBASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 AL513478.4-201ENST00000641636 310 ntBASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 AC007342.9-201ENST00000623877 1385 ntBASIC4.51□□□□□ -1.69
CCDC65Q8IXS2 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC65Q8IXS2 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms