Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.51□□□□□ -1.69
LTBQ06643 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.51□□□□□ -1.69
LTBQ06643 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LTBQ06643 RPL34P26-201ENST00000445636 354 ntBASIC4.51□□□□□ -1.69
LTBQ06643 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LTBQ06643 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.51□□□□□ -1.69
LTBQ06643 AC107015.1-201ENST00000466902 747 ntBASIC4.51□□□□□ -1.69
LTBQ06643 RPL23AP44-201ENST00000482216 473 ntBASIC4.51□□□□□ -1.69
LTBQ06643 HMGN2P25-201ENST00000486956 268 ntBASIC4.51□□□□□ -1.69
LTBQ06643 AC026979.1-201ENST00000492525 396 ntBASIC4.51□□□□□ -1.69
LTBQ06643 RN7SL604P-201ENST00000492589 296 ntBASIC4.51□□□□□ -1.69
LTBQ06643 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LTBQ06643 RPF2P2-201ENST00000504693 896 ntBASIC4.51□□□□□ -1.69
LTBQ06643 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.51□□□□□ -1.69
LTBQ06643 DEFB130C-202ENST00000530001 230 ntBASIC4.51□□□□□ -1.69
LTBQ06643 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LTBQ06643 AC005868.1-201ENST00000536421 331 ntBASIC4.51□□□□□ -1.69
LTBQ06643 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.51□□□□□ -1.69
LTBQ06643 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.51□□□□□ -1.69
LTBQ06643 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.51□□□□□ -1.69
LTBQ06643 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.51□□□□□ -1.69
LTBQ06643 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.51□□□□□ -1.69
LTBQ06643 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.51□□□□□ -1.69
LTBQ06643 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.51□□□□□ -1.69
LTBQ06643 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.51□□□□□ -1.69
LTBQ06643 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.51□□□□□ -1.69
LTBQ06643 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.51□□□□□ -1.69
LTBQ06643 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.51□□□□□ -1.69
LTBQ06643 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.51□□□□□ -1.69
LTBQ06643 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
LTBQ06643 AC087385.3-201ENST00000620477 187 ntBASIC4.51□□□□□ -1.69
LTBQ06643 RPL23AP61-201ENST00000623642 466 ntBASIC4.51□□□□□ -1.69
LTBQ06643 AC007490.1-201ENST00000624321 703 ntBASIC4.51□□□□□ -1.69
LTBQ06643 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LTBQ06643 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
LTBQ06643 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LTBQ06643 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.51□□□□□ -1.69
LTBQ06643 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
LTBQ06643 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.51□□□□□ -1.69
LTBQ06643 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LTBQ06643 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LTBQ06643 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LTBQ06643 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LTBQ06643 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.51□□□□□ -1.69
LTBQ06643 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LTBQ06643 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
LTBQ06643 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LTBQ06643 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.5□□□□□ -1.69
LTBQ06643 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LTBQ06643 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.5□□□□□ -1.69
LTBQ06643 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
LTBQ06643 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
LTBQ06643 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.5□□□□□ -1.69
LTBQ06643 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LTBQ06643 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.5□□□□□ -1.69
LTBQ06643 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LTBQ06643 SNURFL-201ENST00000309296 343 ntBASIC4.5□□□□□ -1.69
LTBQ06643 Y_RNA.51-201ENST00000362725 102 ntBASIC4.5□□□□□ -1.69
LTBQ06643 RNU6-249P-201ENST00000363016 102 ntBASIC4.5□□□□□ -1.69
LTBQ06643 RN7SKP227-201ENST00000364445 330 ntBASIC4.5□□□□□ -1.69
LTBQ06643 RNA5SP479-201ENST00000364858 117 ntBASIC4.5□□□□□ -1.69
LTBQ06643 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
LTBQ06643 ERHP2-201ENST00000402323 299 ntBASIC4.5□□□□□ -1.69
LTBQ06643 MIR1271-201ENST00000408537 86 ntBASIC4.5□□□□□ -1.69
LTBQ06643 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.5□□□□□ -1.69
LTBQ06643 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.5□□□□□ -1.69
LTBQ06643 AC246680.2-201ENST00000422106 389 ntBASIC4.5□□□□□ -1.69
LTBQ06643 AL365203.2-201ENST00000423444 196 ntBASIC4.5□□□□□ -1.69
LTBQ06643 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.5□□□□□ -1.69
LTBQ06643 RAC1P8-201ENST00000427086 527 ntBASIC4.5□□□□□ -1.69
LTBQ06643 AL035407.1-201ENST00000429211 571 ntBASIC4.5□□□□□ -1.69
LTBQ06643 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.5□□□□□ -1.69
LTBQ06643 MTCO2P3-201ENST00000442543 421 ntBASIC4.5□□□□□ -1.69
LTBQ06643 MTCYBP42-201ENST00000444653 1130 ntBASIC4.5□□□□□ -1.69
LTBQ06643 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.5□□□□□ -1.69
LTBQ06643 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.5□□□□□ -1.69
LTBQ06643 AL354714.3-201ENST00000447284 493 ntBASIC4.5□□□□□ -1.69
LTBQ06643 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.5□□□□□ -1.69
LTBQ06643 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.5□□□□□ -1.69
LTBQ06643 AC233982.1-201ENST00000451247 436 ntBASIC4.5□□□□□ -1.69
LTBQ06643 RPL31P3-201ENST00000458430 332 ntBASIC4.5□□□□□ -1.69
LTBQ06643 AL591473.1-201ENST00000464297 313 ntBASIC4.5□□□□□ -1.69
LTBQ06643 MTND3P7-201ENST00000474435 343 ntBASIC4.5□□□□□ -1.69
LTBQ06643 RPL23AP72-201ENST00000492447 435 ntBASIC4.5□□□□□ -1.69
LTBQ06643 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.5□□□□□ -1.69
LTBQ06643 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.5□□□□□ -1.69
LTBQ06643 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.5□□□□□ -1.69
LTBQ06643 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.5□□□□□ -1.69
LTBQ06643 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.5□□□□□ -1.69
LTBQ06643 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LTBQ06643 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.5□□□□□ -1.69
LTBQ06643 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.5□□□□□ -1.69
LTBQ06643 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.5□□□□□ -1.69
LTBQ06643 AP001269.3-201ENST00000588718 329 ntBASIC4.5□□□□□ -1.69
LTBQ06643 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.5□□□□□ -1.69
LTBQ06643 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.5□□□□□ -1.69
LTBQ06643 DPRXP5-201ENST00000604662 539 ntBASIC4.5□□□□□ -1.69
LTBQ06643 AC093799.2-201ENST00000610062 578 ntBASIC4.5□□□□□ -1.69
LTBQ06643 Z95327.3-201ENST00000610385 572 ntBASIC4.5□□□□□ -1.69
LTBQ06643 AC068792.1-201ENST00000621354 417 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms