Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.42□□□□□ -1.7
PDX1P52945 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.42□□□□□ -1.7
PDX1P52945 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PDX1P52945 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDX1P52945 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDX1P52945 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDX1P52945 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDX1P52945 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDX1P52945 AC139713.2-215ENST00000641428 5037 ntBASIC4.41□□□□□ -1.7
PDX1P52945 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
PDX1P52945 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDX1P52945 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDX1P52945 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PDX1P52945 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDX1P52945 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.41□□□□□ -1.7
PDX1P52945 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDX1P52945 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
PDX1P52945 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDX1P52945 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDX1P52945 AL133268.1-201ENST00000405676 1401 ntBASIC4.41□□□□□ -1.7
PDX1P52945 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
PDX1P52945 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PDX1P52945 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PDX1P52945 RNU5B-1-201ENST00000363286 116 ntBASIC4.41□□□□□ -1.7
PDX1P52945 SNORA72.3-201ENST00000365074 132 ntBASIC4.41□□□□□ -1.7
PDX1P52945 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.41□□□□□ -1.7
PDX1P52945 SNORD65C-201ENST00000390962 71 ntBASIC4.41□□□□□ -1.7
PDX1P52945 AL080315.1-201ENST00000406055 466 ntBASIC4.41□□□□□ -1.7
PDX1P52945 AP000357.1-201ENST00000409926 1165 ntBASIC4.41□□□□□ -1.7
PDX1P52945 RN7SKP263-201ENST00000411194 309 ntBASIC4.41□□□□□ -1.7
PDX1P52945 UBE2V1P9-201ENST00000414760 368 ntBASIC4.41□□□□□ -1.7
PDX1P52945 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PDX1P52945 PTP4A1P7-201ENST00000423476 514 ntBASIC4.41□□□□□ -1.7
PDX1P52945 RPS27AP12-201ENST00000429552 465 ntBASIC4.41□□□□□ -1.7
PDX1P52945 AC004854.1-201ENST00000440356 349 ntBASIC4.41□□□□□ -1.7
PDX1P52945 NPM1P39-201ENST00000449818 867 ntBASIC4.41□□□□□ -1.7
PDX1P52945 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.41□□□□□ -1.7
PDX1P52945 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.41□□□□□ -1.7
PDX1P52945 AC104164.3-201ENST00000467363 1258 ntBASIC4.41□□□□□ -1.7
PDX1P52945 RN7SL303P-201ENST00000469773 251 ntBASIC4.41□□□□□ -1.7
PDX1P52945 AC108751.2-201ENST00000469993 231 ntBASIC4.41□□□□□ -1.7
PDX1P52945 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.41□□□□□ -1.7
PDX1P52945 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.41□□□□□ -1.7
PDX1P52945 AP002812.4-201ENST00000532139 286 ntBASIC4.41□□□□□ -1.7
PDX1P52945 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.41□□□□□ -1.7
PDX1P52945 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.41□□□□□ -1.7
PDX1P52945 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDX1P52945 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.41□□□□□ -1.7
PDX1P52945 CYB5AP5-201ENST00000549779 389 ntBASIC4.41□□□□□ -1.7
PDX1P52945 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.41□□□□□ -1.7
PDX1P52945 AC011611.5-201ENST00000552477 578 ntBASIC4.41□□□□□ -1.7
PDX1P52945 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.41□□□□□ -1.7
PDX1P52945 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.41□□□□□ -1.7
PDX1P52945 AL121594.4-201ENST00000556211 1196 ntBASIC4.41□□□□□ -1.7
PDX1P52945 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.41□□□□□ -1.7
PDX1P52945 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.41□□□□□ -1.7
PDX1P52945 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.41□□□□□ -1.7
PDX1P52945 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.41□□□□□ -1.7
PDX1P52945 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.41□□□□□ -1.7
PDX1P52945 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.41□□□□□ -1.7
PDX1P52945 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.41□□□□□ -1.7
PDX1P52945 IMMP1LP1-201ENST00000605170 488 ntBASIC4.41□□□□□ -1.7
PDX1P52945 AL050303.3-201ENST00000613704 284 ntBASIC4.41□□□□□ -1.7
PDX1P52945 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.41□□□□□ -1.7
PDX1P52945 AL672167.1-203ENST00000641299 2975 ntBASIC4.41□□□□□ -1.7
PDX1P52945 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDX1P52945 AC126323.6-202ENST00000568092 3511 ntBASIC4.41□□□□□ -1.7
PDX1P52945 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
PDX1P52945 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PDX1P52945 AP000756.2-201ENST00000624168 2567 ntBASIC4.41□□□□□ -1.7
PDX1P52945 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.41□□□□□ -1.7
PDX1P52945 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.41□□□□□ -1.7
PDX1P52945 RNF6P1-201ENST00000444889 1784 ntBASIC4.4□□□□□ -1.7
PDX1P52945 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PDX1P52945 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
PDX1P52945 AC135352.1-201ENST00000506173 1418 ntBASIC4.4□□□□□ -1.7
PDX1P52945 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
PDX1P52945 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PDX1P52945 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PDX1P52945 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PDX1P52945 RNU6-932P-201ENST00000391108 106 ntBASIC4.4□□□□□ -1.71
PDX1P52945 RN7SKP27-201ENST00000410684 333 ntBASIC4.4□□□□□ -1.71
PDX1P52945 TMSB10P2-201ENST00000416049 131 ntBASIC4.4□□□□□ -1.71
PDX1P52945 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.4□□□□□ -1.71
PDX1P52945 OR6C64P-201ENST00000419708 825 ntBASIC4.4□□□□□ -1.71
PDX1P52945 AC115285.1-201ENST00000424879 736 ntBASIC4.4□□□□□ -1.71
PDX1P52945 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.4□□□□□ -1.71
PDX1P52945 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.4□□□□□ -1.71
PDX1P52945 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PDX1P52945 ELOCP6-201ENST00000429066 328 ntBASIC4.4□□□□□ -1.71
PDX1P52945 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.4□□□□□ -1.71
PDX1P52945 AC092447.2-201ENST00000435487 669 ntBASIC4.4□□□□□ -1.71
PDX1P52945 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.4□□□□□ -1.71
PDX1P52945 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.4□□□□□ -1.71
PDX1P52945 AL035407.2-201ENST00000454090 378 ntBASIC4.4□□□□□ -1.71
PDX1P52945 RPL7P32-201ENST00000457119 744 ntBASIC4.4□□□□□ -1.71
PDX1P52945 ELOCP12-201ENST00000458706 328 ntBASIC4.4□□□□□ -1.71
PDX1P52945 AP000942.1-201ENST00000463969 747 ntBASIC4.4□□□□□ -1.71
PDX1P52945 METTL15P1-201ENST00000481421 1045 ntBASIC4.4□□□□□ -1.71
PDX1P52945 AC005912.1-201ENST00000495392 255 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms