Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.26□□□□□ -1.73
TNFSF9P41273 GAPDHP36-201ENST00000480688 918 ntBASIC4.26□□□□□ -1.73
TNFSF9P41273 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.26□□□□□ -1.73
TNFSF9P41273 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TNFSF9P41273 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TNFSF9P41273 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.26□□□□□ -1.73
TNFSF9P41273 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.26□□□□□ -1.73
TNFSF9P41273 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.26□□□□□ -1.73
TNFSF9P41273 GNRHR2P1-201ENST00000555315 631 ntBASIC4.26□□□□□ -1.73
TNFSF9P41273 AC007620.3-201ENST00000608131 497 ntBASIC4.26□□□□□ -1.73
TNFSF9P41273 AC019131.2-201ENST00000609071 870 ntBASIC4.26□□□□□ -1.73
TNFSF9P41273 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.26□□□□□ -1.73
TNFSF9P41273 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.26□□□□□ -1.73
TNFSF9P41273 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.26□□□□□ -1.73
TNFSF9P41273 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
TNFSF9P41273 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.26□□□□□ -1.73
TNFSF9P41273 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TNFSF9P41273 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
TNFSF9P41273 NEAT1-202ENST00000501122 22743 ntBASIC4.26□□□□□ -1.73
TNFSF9P41273 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
TNFSF9P41273 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFSF9P41273 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TNFSF9P41273 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFSF9P41273 AC009302.1-201ENST00000417147 390 ntBASIC4.25□□□□□ -1.73
TNFSF9P41273 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.25□□□□□ -1.73
TNFSF9P41273 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.25□□□□□ -1.73
TNFSF9P41273 OR6C64P-201ENST00000419708 825 ntBASIC4.25□□□□□ -1.73
TNFSF9P41273 AL389915.1-201ENST00000422463 466 ntBASIC4.25□□□□□ -1.73
TNFSF9P41273 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.25□□□□□ -1.73
TNFSF9P41273 RPL31P53-201ENST00000457065 348 ntBASIC4.25□□□□□ -1.73
TNFSF9P41273 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.25□□□□□ -1.73
TNFSF9P41273 LARP7P4-201ENST00000481075 878 ntBASIC4.25□□□□□ -1.73
TNFSF9P41273 RPL7P24-201ENST00000493052 752 ntBASIC4.25□□□□□ -1.73
TNFSF9P41273 PPM1AP1-201ENST00000502740 1135 ntBASIC4.25□□□□□ -1.73
TNFSF9P41273 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.25□□□□□ -1.73
TNFSF9P41273 AC021242.1-201ENST00000507315 2035 ntBASIC4.25□□□□□ -1.73
TNFSF9P41273 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.25□□□□□ -1.73
TNFSF9P41273 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.25□□□□□ -1.73
TNFSF9P41273 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.25□□□□□ -1.73
TNFSF9P41273 OR8X1P-201ENST00000534542 869 ntBASIC4.25□□□□□ -1.73
TNFSF9P41273 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.25□□□□□ -1.73
TNFSF9P41273 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.25□□□□□ -1.73
TNFSF9P41273 HSPE1P5-201ENST00000561489 272 ntBASIC4.25□□□□□ -1.73
TNFSF9P41273 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.25□□□□□ -1.73
TNFSF9P41273 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TNFSF9P41273 FAM60CP-201ENST00000591086 664 ntBASIC4.25□□□□□ -1.73
TNFSF9P41273 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.25□□□□□ -1.73
TNFSF9P41273 AC005255.1-201ENST00000593748 216 ntBASIC4.25□□□□□ -1.73
TNFSF9P41273 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.25□□□□□ -1.73
TNFSF9P41273 AC117490.2-201ENST00000610042 594 ntBASIC4.25□□□□□ -1.73
TNFSF9P41273 AC244517.3-201ENST00000616254 1235 ntBASIC4.25□□□□□ -1.73
TNFSF9P41273 AC099669.2-201ENST00000616549 437 ntBASIC4.25□□□□□ -1.73
TNFSF9P41273 RMST_5.1-201ENST00000618704 126 ntBASIC4.25□□□□□ -1.73
TNFSF9P41273 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.25□□□□□ -1.73
TNFSF9P41273 AL354798.1-201ENST00000622505 329 ntBASIC4.25□□□□□ -1.73
TNFSF9P41273 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
TNFSF9P41273 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFSF9P41273 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.25□□□□□ -1.73
TNFSF9P41273 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TNFSF9P41273 AL450326.2-201ENST00000421913 1962 ntBASIC4.25□□□□□ -1.73
TNFSF9P41273 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
TNFSF9P41273 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFSF9P41273 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TNFSF9P41273 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFSF9P41273 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.25□□□□□ -1.73
TNFSF9P41273 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TNFSF9P41273 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TNFSF9P41273 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.24□□□□□ -1.73
TNFSF9P41273 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TNFSF9P41273 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TNFSF9P41273 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TNFSF9P41273 CYP1D1P-201ENST00000416662 1433 ntBASIC4.24□□□□□ -1.73
TNFSF9P41273 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TNFSF9P41273 SNORA62.3-201ENST00000365110 153 ntBASIC4.24□□□□□ -1.73
TNFSF9P41273 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TNFSF9P41273 MIR30B-201ENST00000384850 88 ntBASIC4.24□□□□□ -1.73
TNFSF9P41273 ATP5F1P3-201ENST00000397213 657 ntBASIC4.24□□□□□ -1.73
TNFSF9P41273 AL034403.1-201ENST00000399414 885 ntBASIC4.24□□□□□ -1.73
TNFSF9P41273 AL512430.2-201ENST00000406786 339 ntBASIC4.24□□□□□ -1.73
TNFSF9P41273 TRIM60P17-201ENST00000415181 719 ntBASIC4.24□□□□□ -1.73
TNFSF9P41273 Z74696.2-201ENST00000436514 498 ntBASIC4.24□□□□□ -1.73
TNFSF9P41273 ELOCP8-201ENST00000439309 332 ntBASIC4.24□□□□□ -1.73
TNFSF9P41273 HMGB1P37-201ENST00000439613 609 ntBASIC4.24□□□□□ -1.73
TNFSF9P41273 ELOCP15-201ENST00000442090 332 ntBASIC4.24□□□□□ -1.73
TNFSF9P41273 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.24□□□□□ -1.73
TNFSF9P41273 C1DP3-201ENST00000455013 423 ntBASIC4.24□□□□□ -1.73
TNFSF9P41273 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.24□□□□□ -1.73
TNFSF9P41273 RPS3AP6-201ENST00000484430 795 ntBASIC4.24□□□□□ -1.73
TNFSF9P41273 RN7SL323P-201ENST00000494712 295 ntBASIC4.24□□□□□ -1.73
TNFSF9P41273 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.24□□□□□ -1.73
TNFSF9P41273 AC146944.2-203ENST00000502493 354 ntBASIC4.24□□□□□ -1.73
TNFSF9P41273 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.24□□□□□ -1.73
TNFSF9P41273 AC139495.1-202ENST00000513164 354 ntBASIC4.24□□□□□ -1.73
TNFSF9P41273 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.24□□□□□ -1.73
TNFSF9P41273 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.24□□□□□ -1.73
TNFSF9P41273 AC069240.1-201ENST00000548774 375 ntBASIC4.24□□□□□ -1.73
TNFSF9P41273 AC087888.1-201ENST00000550884 1254 ntBASIC4.24□□□□□ -1.73
TNFSF9P41273 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.24□□□□□ -1.73
TNFSF9P41273 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.24□□□□□ -1.73
TNFSF9P41273 AL591424.2-201ENST00000617023 128 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms