Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CHRNB1P11230 OR56B2P-202ENST00000641377 2453 ntBASIC4.89□□□□□ -1.63
CHRNB1P11230 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHRNB1P11230 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CHRNB1P11230 Z95331.1-201ENST00000623075 23112 ntBASIC4.89□□□□□ -1.63
CHRNB1P11230 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.89□□□□□ -1.63
CHRNB1P11230 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CHRNB1P11230 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHRNB1P11230 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHRNB1P11230 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.89□□□□□ -1.63
CHRNB1P11230 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CHRNB1P11230 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CHRNB1P11230 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.89□□□□□ -1.63
CHRNB1P11230 Y_RNA.472-201ENST00000384322 102 ntBASIC4.89□□□□□ -1.63
CHRNB1P11230 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CHRNB1P11230 SNORD65C-201ENST00000390962 71 ntBASIC4.89□□□□□ -1.63
CHRNB1P11230 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.89□□□□□ -1.63
CHRNB1P11230 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.89□□□□□ -1.63
CHRNB1P11230 RN7SKP27-201ENST00000410684 333 ntBASIC4.89□□□□□ -1.63
CHRNB1P11230 AL590806.1-201ENST00000415818 853 ntBASIC4.89□□□□□ -1.63
CHRNB1P11230 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.89□□□□□ -1.63
CHRNB1P11230 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.89□□□□□ -1.63
CHRNB1P11230 AL645608.4-201ENST00000423619 154 ntBASIC4.89□□□□□ -1.63
CHRNB1P11230 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.89□□□□□ -1.63
CHRNB1P11230 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.89□□□□□ -1.63
CHRNB1P11230 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.89□□□□□ -1.63
CHRNB1P11230 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.89□□□□□ -1.63
CHRNB1P11230 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.89□□□□□ -1.63
CHRNB1P11230 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.89□□□□□ -1.63
CHRNB1P11230 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CHRNB1P11230 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.89□□□□□ -1.63
CHRNB1P11230 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CHRNB1P11230 RPL7AP10-201ENST00000481016 791 ntBASIC4.89□□□□□ -1.63
CHRNB1P11230 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.89□□□□□ -1.63
CHRNB1P11230 AC119751.1-201ENST00000513357 765 ntBASIC4.89□□□□□ -1.63
CHRNB1P11230 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.89□□□□□ -1.63
CHRNB1P11230 RN7SKP34-201ENST00000516142 244 ntBASIC4.89□□□□□ -1.63
CHRNB1P11230 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.89□□□□□ -1.63
CHRNB1P11230 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.89□□□□□ -1.63
CHRNB1P11230 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.89□□□□□ -1.63
CHRNB1P11230 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.89□□□□□ -1.63
CHRNB1P11230 AL049839.1-201ENST00000556151 657 ntBASIC4.89□□□□□ -1.63
CHRNB1P11230 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.89□□□□□ -1.63
CHRNB1P11230 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.89□□□□□ -1.63
CHRNB1P11230 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.89□□□□□ -1.63
CHRNB1P11230 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.89□□□□□ -1.63
CHRNB1P11230 MTND4LP24-201ENST00000572277 291 ntBASIC4.89□□□□□ -1.63
CHRNB1P11230 MIR3160-1-201ENST00000577972 85 ntBASIC4.89□□□□□ -1.63
CHRNB1P11230 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.89□□□□□ -1.63
CHRNB1P11230 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.89□□□□□ -1.63
CHRNB1P11230 AC124856.1-201ENST00000600819 896 ntBASIC4.89□□□□□ -1.63
CHRNB1P11230 Z94722.1-201ENST00000604328 474 ntBASIC4.89□□□□□ -1.63
CHRNB1P11230 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.89□□□□□ -1.63
CHRNB1P11230 MIR6716-201ENST00000613413 80 ntBASIC4.89□□□□□ -1.63
CHRNB1P11230 FRG1HP-204ENST00000617940 757 ntBASIC4.89□□□□□ -1.63
CHRNB1P11230 AP004607.9-201ENST00000618202 316 ntBASIC4.89□□□□□ -1.63
CHRNB1P11230 AC073569.3-201ENST00000619055 682 ntBASIC4.89□□□□□ -1.63
CHRNB1P11230 AC006840.1-201ENST00000623069 542 ntBASIC4.89□□□□□ -1.63
CHRNB1P11230 AC024023.1-201ENST00000624530 922 ntBASIC4.89□□□□□ -1.63
CHRNB1P11230 AC017037.3-201ENST00000625016 472 ntBASIC4.89□□□□□ -1.63
CHRNB1P11230 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.89□□□□□ -1.63
CHRNB1P11230 AL121594.5-201ENST00000631724 573 ntBASIC4.89□□□□□ -1.63
CHRNB1P11230 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CHRNB1P11230 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.89□□□□□ -1.63
CHRNB1P11230 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CHRNB1P11230 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHRNB1P11230 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CHRNB1P11230 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHRNB1P11230 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHRNB1P11230 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CHRNB1P11230 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
CHRNB1P11230 AC100778.3-201ENST00000580060 1750 ntBASIC4.88□□□□□ -1.63
CHRNB1P11230 ZNF876P-202ENST00000398732 1485 ntBASIC4.88□□□□□ -1.63
CHRNB1P11230 AC008758.3-201ENST00000507003 1829 ntBASIC4.88□□□□□ -1.63
CHRNB1P11230 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNB1P11230 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNB1P11230 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNB1P11230 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CHRNB1P11230 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CHRNB1P11230 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNB1P11230 AC104118.1-201ENST00000607625 1589 ntBASIC4.88□□□□□ -1.63
CHRNB1P11230 UGT2B26P-201ENST00000508672 1613 ntBASIC4.88□□□□□ -1.63
CHRNB1P11230 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNB1P11230 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNB1P11230 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNB1P11230 OR5H2-201ENST00000355273 945 ntBASIC4.88□□□□□ -1.63
CHRNB1P11230 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CHRNB1P11230 RNA5SP515-201ENST00000364570 118 ntBASIC4.88□□□□□ -1.63
CHRNB1P11230 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHRNB1P11230 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
CHRNB1P11230 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.88□□□□□ -1.63
CHRNB1P11230 AL356320.2-201ENST00000417263 507 ntBASIC4.88□□□□□ -1.63
CHRNB1P11230 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.88□□□□□ -1.63
CHRNB1P11230 NANOGP2-201ENST00000435391 727 ntBASIC4.88□□□□□ -1.63
CHRNB1P11230 HMGB3P9-201ENST00000441799 583 ntBASIC4.88□□□□□ -1.63
CHRNB1P11230 AC097499.1-201ENST00000444277 208 ntBASIC4.88□□□□□ -1.63
CHRNB1P11230 HMGB3P6-201ENST00000444896 598 ntBASIC4.88□□□□□ -1.63
CHRNB1P11230 AC073587.1-201ENST00000447093 876 ntBASIC4.88□□□□□ -1.63
CHRNB1P11230 AL162591.2-201ENST00000449634 317 ntBASIC4.88□□□□□ -1.63
CHRNB1P11230 RPL7AP28-201ENST00000464513 571 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms