Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.38□□□□□ -1.55
COL20A1Q9P218 RPL36AP41-201ENST00000493820 306 ntBASIC5.38□□□□□ -1.55
COL20A1Q9P218 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.38□□□□□ -1.55
COL20A1Q9P218 AK3P4-201ENST00000504283 583 ntBASIC5.38□□□□□ -1.55
COL20A1Q9P218 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.38□□□□□ -1.55
COL20A1Q9P218 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.38□□□□□ -1.55
COL20A1Q9P218 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.38□□□□□ -1.55
COL20A1Q9P218 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.38□□□□□ -1.55
COL20A1Q9P218 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.38□□□□□ -1.55
COL20A1Q9P218 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.38□□□□□ -1.55
COL20A1Q9P218 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.38□□□□□ -1.55
COL20A1Q9P218 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.38□□□□□ -1.55
COL20A1Q9P218 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.38□□□□□ -1.55
COL20A1Q9P218 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.38□□□□□ -1.55
COL20A1Q9P218 AC021171.1-201ENST00000603137 706 ntBASIC5.38□□□□□ -1.55
COL20A1Q9P218 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.38□□□□□ -1.55
COL20A1Q9P218 TUSC7.1-201ENST00000610969 165 ntBASIC5.38□□□□□ -1.55
COL20A1Q9P218 AC092106.3-201ENST00000611308 722 ntBASIC5.38□□□□□ -1.55
COL20A1Q9P218 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.38□□□□□ -1.55
COL20A1Q9P218 ATE1-AS1-202ENST00000636460 506 ntBASIC5.38□□□□□ -1.55
COL20A1Q9P218 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL20A1Q9P218 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
COL20A1Q9P218 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL20A1Q9P218 CASC19-206ENST00000641028 1430 ntBASIC5.38□□□□□ -1.55
COL20A1Q9P218 AL022311.1-201ENST00000623726 19416 ntBASIC5.38□□□□□ -1.55
COL20A1Q9P218 KARSP3-201ENST00000571212 1504 ntBASIC5.38□□□□□ -1.55
COL20A1Q9P218 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.38□□□□□ -1.55
COL20A1Q9P218 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL20A1Q9P218 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
COL20A1Q9P218 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL20A1Q9P218 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
COL20A1Q9P218 AC092079.1-201ENST00000558620 1985 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 AC073136.1-201ENST00000449426 2884 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 FAM3C2-201ENST00000312214 681 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL20A1Q9P218 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL20A1Q9P218 U3.22-201ENST00000391120 215 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
COL20A1Q9P218 TMSB4XP8-201ENST00000402089 135 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 AL590084.1-201ENST00000407885 387 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 TMSB4XP6-201ENST00000415187 135 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 TMSB4XP1-201ENST00000424567 135 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.37□□□□□ -1.55
COL20A1Q9P218 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.37□□□□□ -1.55
COL20A1Q9P218 AL009174.1-201ENST00000426577 416 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 MTCO1P3-201ENST00000429327 192 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 RPL7P4-203ENST00000430239 730 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 MTND5P25-201ENST00000430499 799 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.37□□□□□ -1.55
COL20A1Q9P218 SETP8-201ENST00000435341 628 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL20A1Q9P218 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.37□□□□□ -1.55
COL20A1Q9P218 UBE2V1P5-201ENST00000440070 405 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 AC092809.1-201ENST00000441469 474 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.37□□□□□ -1.55
COL20A1Q9P218 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.37□□□□□ -1.55
COL20A1Q9P218 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.37□□□□□ -1.55
COL20A1Q9P218 USP9YP25-201ENST00000457708 443 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 GAPDHP39-201ENST00000481866 979 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.37□□□□□ -1.55
COL20A1Q9P218 AC108043.1-201ENST00000512696 574 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 RNU6-416P-201ENST00000516265 103 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 RNU5A-4P-201ENST00000516588 111 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 snoU109.6-201ENST00000516831 118 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.37□□□□□ -1.55
COL20A1Q9P218 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.37□□□□□ -1.55
COL20A1Q9P218 MIR3912-201ENST00000577566 105 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 BPTFP1-201ENST00000579209 492 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.37□□□□□ -1.55
COL20A1Q9P218 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.37□□□□□ -1.55
COL20A1Q9P218 MRPS35P3-201ENST00000603189 709 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 AC023813.4-201ENST00000607580 580 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL20A1Q9P218 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.37□□□□□ -1.55
COL20A1Q9P218 AC012414.7-202ENST00000622705 1090 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 CDRT1-208ENST00000630868 794 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL20A1Q9P218 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL20A1Q9P218 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL20A1Q9P218 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.37□□□□□ -1.55
COL20A1Q9P218 SGO1P1-201ENST00000603525 1447 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
COL20A1Q9P218 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
COL20A1Q9P218 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
COL20A1Q9P218 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL20A1Q9P218 AC025574.1-201ENST00000554784 1653 ntBASIC5.37□□□□□ -1.55
COL20A1Q9P218 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL20A1Q9P218 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL20A1Q9P218 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL20A1Q9P218 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL20A1Q9P218 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL20A1Q9P218 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL20A1Q9P218 MAPK10-328ENST00000641553 4009 ntBASIC5.36□□□□□ -1.55
COL20A1Q9P218 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL20A1Q9P218 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.36□□□□□ -1.55
COL20A1Q9P218 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
COL20A1Q9P218 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL20A1Q9P218 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL20A1Q9P218 snoZ40.1-201ENST00000364540 72 ntBASIC5.36□□□□□ -1.55
COL20A1Q9P218 RNU6-304P-201ENST00000364855 107 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms