Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 NF1P10-201ENST00000613227 742 ntBASIC4.92□□□□□ -1.62
SNED1Q8TER0 AL138721.1-201ENST00000616756 179 ntBASIC4.92□□□□□ -1.62
SNED1Q8TER0 AC023509.5-201ENST00000617434 807 ntBASIC4.92□□□□□ -1.62
SNED1Q8TER0 AC022306.3-201ENST00000619930 550 ntBASIC4.92□□□□□ -1.62
SNED1Q8TER0 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.92□□□□□ -1.62
SNED1Q8TER0 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SNED1Q8TER0 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNED1Q8TER0 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SNED1Q8TER0 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.92□□□□□ -1.62
SNED1Q8TER0 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNED1Q8TER0 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNED1Q8TER0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNED1Q8TER0 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNED1Q8TER0 MIR491-201ENST00000384877 84 ntBASIC4.91□□□□□ -1.62
SNED1Q8TER0 HMGB3P19-201ENST00000403971 560 ntBASIC4.91□□□□□ -1.62
SNED1Q8TER0 SEPT7P8-201ENST00000413308 775 ntBASIC4.91□□□□□ -1.62
SNED1Q8TER0 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.91□□□□□ -1.62
SNED1Q8TER0 MTND4P11-201ENST00000417020 1058 ntBASIC4.91□□□□□ -1.62
SNED1Q8TER0 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.91□□□□□ -1.62
SNED1Q8TER0 RBMY1KP-201ENST00000423480 476 ntBASIC4.91□□□□□ -1.62
SNED1Q8TER0 AC106901.1-201ENST00000425086 698 ntBASIC4.91□□□□□ -1.62
SNED1Q8TER0 MTND1P26-201ENST00000440488 538 ntBASIC4.91□□□□□ -1.62
SNED1Q8TER0 RPS3AP12-201ENST00000443616 753 ntBASIC4.91□□□□□ -1.62
SNED1Q8TER0 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.91□□□□□ -1.62
SNED1Q8TER0 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.91□□□□□ -1.62
SNED1Q8TER0 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.91□□□□□ -1.62
SNED1Q8TER0 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.91□□□□□ -1.62
SNED1Q8TER0 RPS3AP6-201ENST00000484430 795 ntBASIC4.91□□□□□ -1.62
SNED1Q8TER0 UBE2CP3-201ENST00000502715 450 ntBASIC4.91□□□□□ -1.62
SNED1Q8TER0 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.91□□□□□ -1.62
SNED1Q8TER0 AC114322.1-201ENST00000506771 926 ntBASIC4.91□□□□□ -1.62
SNED1Q8TER0 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.91□□□□□ -1.62
SNED1Q8TER0 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.91□□□□□ -1.62
SNED1Q8TER0 HMGN1P15-201ENST00000513870 295 ntBASIC4.91□□□□□ -1.62
SNED1Q8TER0 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNED1Q8TER0 DUX4L52-201ENST00000549363 777 ntBASIC4.91□□□□□ -1.62
SNED1Q8TER0 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
SNED1Q8TER0 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.91□□□□□ -1.62
SNED1Q8TER0 AC008759.1-201ENST00000589783 983 ntBASIC4.91□□□□□ -1.62
SNED1Q8TER0 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.91□□□□□ -1.62
SNED1Q8TER0 BNIP3P40-201ENST00000596017 556 ntBASIC4.91□□□□□ -1.62
SNED1Q8TER0 AC015726.1-201ENST00000602353 681 ntBASIC4.91□□□□□ -1.62
SNED1Q8TER0 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.91□□□□□ -1.62
SNED1Q8TER0 AL645927.2-201ENST00000618350 349 ntBASIC4.91□□□□□ -1.62
SNED1Q8TER0 AC074140.1-201ENST00000621617 208 ntBASIC4.91□□□□□ -1.62
SNED1Q8TER0 AC073530.2-201ENST00000623987 261 ntBASIC4.91□□□□□ -1.62
SNED1Q8TER0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
SNED1Q8TER0 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNED1Q8TER0 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SNED1Q8TER0 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.91□□□□□ -1.62
SNED1Q8TER0 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNED1Q8TER0 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.91□□□□□ -1.62
SNED1Q8TER0 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
SNED1Q8TER0 AC024341.1-201ENST00000526444 1552 ntBASIC4.9□□□□□ -1.62
SNED1Q8TER0 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SNED1Q8TER0 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SNED1Q8TER0 AC067945.1-201ENST00000342609 618 ntBASIC4.9□□□□□ -1.62
SNED1Q8TER0 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.9□□□□□ -1.62
SNED1Q8TER0 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.9□□□□□ -1.62
SNED1Q8TER0 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.9□□□□□ -1.62
SNED1Q8TER0 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.9□□□□□ -1.62
SNED1Q8TER0 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.9□□□□□ -1.62
SNED1Q8TER0 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.9□□□□□ -1.62
SNED1Q8TER0 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.9□□□□□ -1.62
SNED1Q8TER0 AL133162.1-201ENST00000463228 453 ntBASIC4.9□□□□□ -1.62
SNED1Q8TER0 RPS26P28-201ENST00000470806 348 ntBASIC4.9□□□□□ -1.62
SNED1Q8TER0 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SNED1Q8TER0 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.9□□□□□ -1.62
SNED1Q8TER0 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.9□□□□□ -1.62
SNED1Q8TER0 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.9□□□□□ -1.62
SNED1Q8TER0 OR8K2P-201ENST00000524645 927 ntBASIC4.9□□□□□ -1.62
SNED1Q8TER0 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.9□□□□□ -1.62
SNED1Q8TER0 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.9□□□□□ -1.62
SNED1Q8TER0 AC091516.1-201ENST00000549191 703 ntBASIC4.9□□□□□ -1.62
SNED1Q8TER0 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.9□□□□□ -1.62
SNED1Q8TER0 AL121834.1-201ENST00000572284 509 ntBASIC4.9□□□□□ -1.62
SNED1Q8TER0 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.9□□□□□ -1.62
SNED1Q8TER0 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.9□□□□□ -1.62
SNED1Q8TER0 AC097655.1-201ENST00000635075 318 ntBASIC4.9□□□□□ -1.62
SNED1Q8TER0 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
SNED1Q8TER0 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SNED1Q8TER0 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SNED1Q8TER0 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.9□□□□□ -1.63
SNED1Q8TER0 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
SNED1Q8TER0 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.9□□□□□ -1.63
SNED1Q8TER0 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.9□□□□□ -1.63
SNED1Q8TER0 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 SNORA72.3-201ENST00000365074 132 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 RNU6-729P-201ENST00000384399 107 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 KRR1P1-201ENST00000419430 803 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 AL159987.2-201ENST00000432754 307 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 MTCYBP15-201ENST00000433123 1127 ntBASIC4.89□□□□□ -1.63
SNED1Q8TER0 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.89□□□□□ -1.63
SNED1Q8TER0 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SNED1Q8TER0 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms