Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AL691482.1-201ENST00000453255 87 ntBASIC5.19□□□□□ -1.58
HERC6Q8IVU3 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 AC006511.1-201ENST00000470614 315 ntBASIC5.19□□□□□ -1.58
HERC6Q8IVU3 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 MIR3936-201ENST00000584304 110 ntBASIC5.19□□□□□ -1.58
HERC6Q8IVU3 MTCO2P2-201ENST00000591258 225 ntBASIC5.19□□□□□ -1.58
HERC6Q8IVU3 AC006272.2-201ENST00000594725 163 ntBASIC5.19□□□□□ -1.58
HERC6Q8IVU3 VN1R85P-201ENST00000601587 426 ntBASIC5.19□□□□□ -1.58
HERC6Q8IVU3 AC010200.2-201ENST00000605098 235 ntBASIC5.19□□□□□ -1.58
HERC6Q8IVU3 AC024941.1-201ENST00000612250 334 ntBASIC5.19□□□□□ -1.58
HERC6Q8IVU3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 AL121594.5-201ENST00000631724 573 ntBASIC5.19□□□□□ -1.58
HERC6Q8IVU3 OR2L1P-202ENST00000641567 1023 ntBASIC5.19□□□□□ -1.58
HERC6Q8IVU3 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.18□□□□□ -1.58
HERC6Q8IVU3 AC008758.3-201ENST00000507003 1829 ntBASIC5.18□□□□□ -1.58
HERC6Q8IVU3 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.18□□□□□ -1.58
HERC6Q8IVU3 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.18□□□□□ -1.58
HERC6Q8IVU3 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.18□□□□□ -1.58
HERC6Q8IVU3 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HERC6Q8IVU3 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.18□□□□□ -1.58
HERC6Q8IVU3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
HERC6Q8IVU3 AP000568.1-201ENST00000282964 442 ntBASIC5.18□□□□□ -1.58
HERC6Q8IVU3 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HERC6Q8IVU3 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HERC6Q8IVU3 RNU6-77P-201ENST00000410554 91 ntBASIC5.18□□□□□ -1.58
HERC6Q8IVU3 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.18□□□□□ -1.58
HERC6Q8IVU3 AC114814.2-201ENST00000419195 485 ntBASIC5.18□□□□□ -1.58
HERC6Q8IVU3 OSTCP5-201ENST00000425293 453 ntBASIC5.18□□□□□ -1.58
HERC6Q8IVU3 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HERC6Q8IVU3 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.18□□□□□ -1.58
HERC6Q8IVU3 RPL7P4-203ENST00000430239 730 ntBASIC5.18□□□□□ -1.58
HERC6Q8IVU3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.18□□□□□ -1.58
HERC6Q8IVU3 ACTR3P2-201ENST00000439585 1257 ntBASIC5.18□□□□□ -1.58
HERC6Q8IVU3 UBE2V1P5-201ENST00000440070 405 ntBASIC5.18□□□□□ -1.58
HERC6Q8IVU3 EXOSC3P1-201ENST00000448649 500 ntBASIC5.18□□□□□ -1.58
HERC6Q8IVU3 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.18□□□□□ -1.58
HERC6Q8IVU3 RNU7-140P-201ENST00000459546 60 ntBASIC5.18□□□□□ -1.58
HERC6Q8IVU3 RPL21P129-201ENST00000491732 478 ntBASIC5.18□□□□□ -1.58
HERC6Q8IVU3 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.18□□□□□ -1.58
HERC6Q8IVU3 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.18□□□□□ -1.58
HERC6Q8IVU3 AC091868.1-201ENST00000508746 304 ntBASIC5.18□□□□□ -1.58
HERC6Q8IVU3 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.18□□□□□ -1.58
HERC6Q8IVU3 AC007016.1-201ENST00000512110 244 ntBASIC5.18□□□□□ -1.58
HERC6Q8IVU3 AC110760.3-202ENST00000515177 371 ntBASIC5.18□□□□□ -1.58
HERC6Q8IVU3 RNU1-6P-201ENST00000516290 144 ntBASIC5.18□□□□□ -1.58
HERC6Q8IVU3 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.18□□□□□ -1.58
HERC6Q8IVU3 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.18□□□□□ -1.58
HERC6Q8IVU3 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.18□□□□□ -1.58
HERC6Q8IVU3 OR8I1P-201ENST00000529291 931 ntBASIC5.18□□□□□ -1.58
HERC6Q8IVU3 AP001781.1-201ENST00000530977 207 ntBASIC5.18□□□□□ -1.58
HERC6Q8IVU3 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HERC6Q8IVU3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.18□□□□□ -1.58
HERC6Q8IVU3 AL049838.1-201ENST00000563647 981 ntBASIC5.18□□□□□ -1.58
HERC6Q8IVU3 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.18□□□□□ -1.58
HERC6Q8IVU3 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.18□□□□□ -1.58
HERC6Q8IVU3 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HERC6Q8IVU3 AC008782.1-201ENST00000603386 430 ntBASIC5.18□□□□□ -1.58
HERC6Q8IVU3 AL121932.1-201ENST00000605542 214 ntBASIC5.18□□□□□ -1.58
HERC6Q8IVU3 AC018695.5-201ENST00000605872 315 ntBASIC5.18□□□□□ -1.58
HERC6Q8IVU3 AL355816.2-201ENST00000610049 647 ntBASIC5.18□□□□□ -1.58
HERC6Q8IVU3 BX649567.1-201ENST00000642071 1134 ntBASIC5.18□□□□□ -1.58
HERC6Q8IVU3 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HERC6Q8IVU3 AL450345.1-202ENST00000605741 3881 ntBASIC5.18□□□□□ -1.58
HERC6Q8IVU3 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.18□□□□□ -1.58
HERC6Q8IVU3 AP000542.2-201ENST00000623199 6179 ntBASIC5.18□□□□□ -1.58
HERC6Q8IVU3 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
HERC6Q8IVU3 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HERC6Q8IVU3 AC005332.5-201ENST00000591222 2919 ntBASIC5.17□□□□□ -1.58
HERC6Q8IVU3 AC119744.1-201ENST00000454746 1715 ntBASIC5.17□□□□□ -1.58
HERC6Q8IVU3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HERC6Q8IVU3 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.17□□□□□ -1.58
HERC6Q8IVU3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
HERC6Q8IVU3 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.17□□□□□ -1.58
HERC6Q8IVU3 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HERC6Q8IVU3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HERC6Q8IVU3 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
HERC6Q8IVU3 RNU6-353P-201ENST00000364266 108 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms