Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 RNA5SP513-201ENST00000364648 118 ntBASIC4.43□□□□□ -1.7
BRCC3P46736 MIR1179-201ENST00000408703 91 ntBASIC4.43□□□□□ -1.7
BRCC3P46736 AP000357.1-201ENST00000409926 1165 ntBASIC4.43□□□□□ -1.7
BRCC3P46736 RNA5SP146-201ENST00000410743 123 ntBASIC4.43□□□□□ -1.7
BRCC3P46736 AL357078.2-201ENST00000416486 427 ntBASIC4.43□□□□□ -1.7
BRCC3P46736 RPL36AP36-201ENST00000418616 301 ntBASIC4.43□□□□□ -1.7
BRCC3P46736 OR6K4P-201ENST00000423179 955 ntBASIC4.43□□□□□ -1.7
BRCC3P46736 AC115285.1-201ENST00000424879 736 ntBASIC4.43□□□□□ -1.7
BRCC3P46736 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.43□□□□□ -1.7
BRCC3P46736 HMGB3P9-201ENST00000441799 583 ntBASIC4.43□□□□□ -1.7
BRCC3P46736 AL359073.1-201ENST00000448036 403 ntBASIC4.43□□□□□ -1.7
BRCC3P46736 AL627224.1-201ENST00000448334 444 ntBASIC4.43□□□□□ -1.7
BRCC3P46736 DEFB109F-201ENST00000491870 277 ntBASIC4.43□□□□□ -1.7
BRCC3P46736 AC021146.7-201ENST00000509604 775 ntBASIC4.43□□□□□ -1.7
BRCC3P46736 FTH1P21-201ENST00000512179 511 ntBASIC4.43□□□□□ -1.7
BRCC3P46736 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.43□□□□□ -1.7
BRCC3P46736 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.43□□□□□ -1.7
BRCC3P46736 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.43□□□□□ -1.7
BRCC3P46736 AC008759.1-201ENST00000589783 983 ntBASIC4.43□□□□□ -1.7
BRCC3P46736 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.43□□□□□ -1.7
BRCC3P46736 Z82217.1-201ENST00000625157 8149 ntBASIC4.43□□□□□ -1.7
BRCC3P46736 FAM91A3P-201ENST00000456826 2544 ntBASIC4.43□□□□□ -1.7
BRCC3P46736 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
BRCC3P46736 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.43□□□□□ -1.7
BRCC3P46736 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.43□□□□□ -1.7
BRCC3P46736 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.42□□□□□ -1.7
BRCC3P46736 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
BRCC3P46736 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BRCC3P46736 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BRCC3P46736 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
BRCC3P46736 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
BRCC3P46736 AC067945.1-201ENST00000342609 618 ntBASIC4.42□□□□□ -1.7
BRCC3P46736 GSTA12P-201ENST00000402398 508 ntBASIC4.42□□□□□ -1.7
BRCC3P46736 RN7SKP27-201ENST00000410684 333 ntBASIC4.42□□□□□ -1.7
BRCC3P46736 RNU4-6P-201ENST00000410804 122 ntBASIC4.42□□□□□ -1.7
BRCC3P46736 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.42□□□□□ -1.7
BRCC3P46736 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.42□□□□□ -1.7
BRCC3P46736 AL390879.2-203ENST00000426943 1121 ntBASIC4.42□□□□□ -1.7
BRCC3P46736 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.42□□□□□ -1.7
BRCC3P46736 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.42□□□□□ -1.7
BRCC3P46736 AC239367.2-201ENST00000447309 705 ntBASIC4.42□□□□□ -1.7
BRCC3P46736 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.42□□□□□ -1.7
BRCC3P46736 RPL23AP2-201ENST00000471227 466 ntBASIC4.42□□□□□ -1.7
BRCC3P46736 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.42□□□□□ -1.7
BRCC3P46736 TPT1P3-201ENST00000492841 512 ntBASIC4.42□□□□□ -1.7
BRCC3P46736 BNIP3P41-201ENST00000503774 571 ntBASIC4.42□□□□□ -1.7
BRCC3P46736 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.42□□□□□ -1.7
BRCC3P46736 FABP5P6-201ENST00000510588 409 ntBASIC4.42□□□□□ -1.7
BRCC3P46736 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.42□□□□□ -1.7
BRCC3P46736 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.42□□□□□ -1.7
BRCC3P46736 RPL21P7-201ENST00000557463 483 ntBASIC4.42□□□□□ -1.7
BRCC3P46736 AC034105.4-201ENST00000568304 277 ntBASIC4.42□□□□□ -1.7
BRCC3P46736 RN7SL703P-201ENST00000578485 302 ntBASIC4.42□□□□□ -1.7
BRCC3P46736 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
BRCC3P46736 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.42□□□□□ -1.7
BRCC3P46736 AC092474.3-201ENST00000603022 568 ntBASIC4.42□□□□□ -1.7
BRCC3P46736 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.42□□□□□ -1.7
BRCC3P46736 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.42□□□□□ -1.7
BRCC3P46736 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.42□□□□□ -1.7
BRCC3P46736 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.42□□□□□ -1.7
BRCC3P46736 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.42□□□□□ -1.7
BRCC3P46736 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BRCC3P46736 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BRCC3P46736 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BRCC3P46736 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BRCC3P46736 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
BRCC3P46736 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
BRCC3P46736 USP9YP4-201ENST00000424401 1745 ntBASIC4.41□□□□□ -1.7
BRCC3P46736 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BRCC3P46736 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
BRCC3P46736 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.41□□□□□ -1.7
BRCC3P46736 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BRCC3P46736 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
BRCC3P46736 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BRCC3P46736 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.41□□□□□ -1.7
BRCC3P46736 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.41□□□□□ -1.7
BRCC3P46736 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.41□□□□□ -1.7
BRCC3P46736 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
BRCC3P46736 HSPE1P12-201ENST00000412576 301 ntBASIC4.41□□□□□ -1.7
BRCC3P46736 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BRCC3P46736 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BRCC3P46736 OR8F1P-201ENST00000425243 930 ntBASIC4.41□□□□□ -1.7
BRCC3P46736 RPS29P7-201ENST00000439662 171 ntBASIC4.41□□□□□ -1.7
BRCC3P46736 ARL4AP3-201ENST00000441452 574 ntBASIC4.41□□□□□ -1.7
BRCC3P46736 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BRCC3P46736 AC245517.2-201ENST00000442890 346 ntBASIC4.41□□□□□ -1.7
BRCC3P46736 RPS4XP4-201ENST00000443195 763 ntBASIC4.41□□□□□ -1.7
BRCC3P46736 AL157827.1-201ENST00000447622 132 ntBASIC4.41□□□□□ -1.7
BRCC3P46736 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.41□□□□□ -1.7
BRCC3P46736 RPL38P1-201ENST00000460914 211 ntBASIC4.41□□□□□ -1.7
BRCC3P46736 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.41□□□□□ -1.7
BRCC3P46736 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.41□□□□□ -1.7
BRCC3P46736 VN1R105P-201ENST00000486595 910 ntBASIC4.41□□□□□ -1.7
BRCC3P46736 KRT19P6-201ENST00000510983 209 ntBASIC4.41□□□□□ -1.7
BRCC3P46736 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BRCC3P46736 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.41□□□□□ -1.7
BRCC3P46736 MIR4286-201ENST00000580651 93 ntBASIC4.41□□□□□ -1.7
BRCC3P46736 AC093227.2-201ENST00000589357 285 ntBASIC4.41□□□□□ -1.7
BRCC3P46736 AL355802.4-201ENST00000607635 548 ntBASIC4.41□□□□□ -1.7
BRCC3P46736 AC074276.2-201ENST00000619891 348 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms