Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AC073358.1-201ENST00000505671 684 ntBASIC4.54□□□□□ -1.68
TNFRSF1BP20333 AC116353.3-201ENST00000511215 249 ntBASIC4.54□□□□□ -1.68
TNFRSF1BP20333 BX510359.5-201ENST00000515651 304 ntBASIC4.54□□□□□ -1.68
TNFRSF1BP20333 AC083923.1-201ENST00000523708 376 ntBASIC4.54□□□□□ -1.68
TNFRSF1BP20333 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.54□□□□□ -1.68
TNFRSF1BP20333 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.54□□□□□ -1.68
TNFRSF1BP20333 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.54□□□□□ -1.68
TNFRSF1BP20333 UBE2NP1-201ENST00000545592 458 ntBASIC4.54□□□□□ -1.68
TNFRSF1BP20333 AL121766.1-201ENST00000547436 487 ntBASIC4.54□□□□□ -1.68
TNFRSF1BP20333 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.54□□□□□ -1.68
TNFRSF1BP20333 AC044913.1-201ENST00000557200 430 ntBASIC4.54□□□□□ -1.68
TNFRSF1BP20333 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.54□□□□□ -1.68
TNFRSF1BP20333 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.54□□□□□ -1.68
TNFRSF1BP20333 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.54□□□□□ -1.68
TNFRSF1BP20333 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.54□□□□□ -1.68
TNFRSF1BP20333 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.54□□□□□ -1.68
TNFRSF1BP20333 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
TNFRSF1BP20333 MIR3915-201ENST00000578518 97 ntBASIC4.54□□□□□ -1.68
TNFRSF1BP20333 MIR4999-201ENST00000585029 91 ntBASIC4.54□□□□□ -1.68
TNFRSF1BP20333 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.54□□□□□ -1.68
TNFRSF1BP20333 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.54□□□□□ -1.68
TNFRSF1BP20333 RN7SKP299-201ENST00000606679 301 ntBASIC4.54□□□□□ -1.68
TNFRSF1BP20333 AC004492.1-201ENST00000607036 742 ntBASIC4.54□□□□□ -1.68
TNFRSF1BP20333 RNU6-84P-201ENST00000607737 102 ntBASIC4.54□□□□□ -1.68
TNFRSF1BP20333 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.54□□□□□ -1.68
TNFRSF1BP20333 AP000238.1-201ENST00000608759 426 ntBASIC4.54□□□□□ -1.68
TNFRSF1BP20333 AL158063.1-201ENST00000615349 536 ntBASIC4.54□□□□□ -1.68
TNFRSF1BP20333 OR8G7P-201ENST00000616658 848 ntBASIC4.54□□□□□ -1.68
TNFRSF1BP20333 MIR6861-201ENST00000618657 64 ntBASIC4.54□□□□□ -1.68
TNFRSF1BP20333 MIR6837-201ENST00000620884 64 ntBASIC4.54□□□□□ -1.68
TNFRSF1BP20333 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.54□□□□□ -1.68
TNFRSF1BP20333 AC119674.1-212ENST00000641155 993 ntBASIC4.54□□□□□ -1.68
TNFRSF1BP20333 CASC19-264ENST00000641912 1184 ntBASIC4.54□□□□□ -1.68
TNFRSF1BP20333 AP005901.5-201ENST00000545779 1796 ntBASIC4.54□□□□□ -1.68
TNFRSF1BP20333 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
TNFRSF1BP20333 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.54□□□□□ -1.68
TNFRSF1BP20333 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.54□□□□□ -1.68
TNFRSF1BP20333 MTND5P23-201ENST00000430812 1655 ntBASIC4.54□□□□□ -1.68
TNFRSF1BP20333 AP000776.1-201ENST00000530032 1663 ntBASIC4.54□□□□□ -1.68
TNFRSF1BP20333 AL356473.1-201ENST00000406203 1408 ntBASIC4.54□□□□□ -1.68
TNFRSF1BP20333 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.54□□□□□ -1.68
TNFRSF1BP20333 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TNFRSF1BP20333 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
TNFRSF1BP20333 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TNFRSF1BP20333 MTCO1P6-201ENST00000481192 1384 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
TNFRSF1BP20333 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TNFRSF1BP20333 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TNFRSF1BP20333 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
TNFRSF1BP20333 SAMMSON-213ENST00000641336 1521 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
TNFRSF1BP20333 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
TNFRSF1BP20333 AP000542.2-201ENST00000623199 6179 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 RNU6-543P-201ENST00000362576 108 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 RNU4-7P-201ENST00000364758 141 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 Y_RNA.559-201ENST00000384686 107 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 MIR525-201ENST00000384978 85 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.53□□□□□ -1.68
TNFRSF1BP20333 RNA5SP498-201ENST00000411342 120 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 MTCO3P41-201ENST00000414801 328 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 TCEA1P4-201ENST00000415066 844 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 LINC01881-201ENST00000416103 412 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 TBCAP2-201ENST00000416175 326 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.53□□□□□ -1.68
TNFRSF1BP20333 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.53□□□□□ -1.68
TNFRSF1BP20333 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.53□□□□□ -1.68
TNFRSF1BP20333 USP9YP31-201ENST00000431405 881 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.53□□□□□ -1.68
TNFRSF1BP20333 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.53□□□□□ -1.68
TNFRSF1BP20333 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.53□□□□□ -1.68
TNFRSF1BP20333 GTF2IP7-202ENST00000436677 309 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 SPRYD7P1-201ENST00000443861 570 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 TAF9P1-201ENST00000445421 515 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 AL606662.1-201ENST00000445763 553 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.53□□□□□ -1.68
TNFRSF1BP20333 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.53□□□□□ -1.68
TNFRSF1BP20333 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TNFRSF1BP20333 TAF9P2-201ENST00000454958 515 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.53□□□□□ -1.68
TNFRSF1BP20333 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 AC021205.1-201ENST00000468797 348 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 AC108751.2-201ENST00000469993 231 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.53□□□□□ -1.68
TNFRSF1BP20333 AC107401.1-201ENST00000503426 685 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 AC024558.1-201ENST00000505008 528 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TNFRSF1BP20333 AF213884.2-201ENST00000510417 903 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 AC011352.1-201ENST00000512300 793 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 RNA5SP43-201ENST00000516559 110 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 AC023632.1-201ENST00000518463 375 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.53□□□□□ -1.68
TNFRSF1BP20333 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.53□□□□□ -1.68
TNFRSF1BP20333 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.53□□□□□ -1.68
TNFRSF1BP20333 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.53□□□□□ -1.68
TNFRSF1BP20333 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TNFRSF1BP20333 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TNFRSF1BP20333 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.53□□□□□ -1.68
TNFRSF1BP20333 AC008126.1-201ENST00000549019 480 ntBASIC4.53□□□□□ -1.68
TNFRSF1BP20333 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 177 ms