Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC2.31□□□□□ -2.04
APOBP04114 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
APOBP04114 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
APOBP04114 AC245054.1-201ENST00000420944 258 ntBASIC2.31□□□□□ -2.04
APOBP04114 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC2.31□□□□□ -2.04
APOBP04114 IGLV3-26-201ENST00000520756 302 ntBASIC2.31□□□□□ -2.04
APOBP04114 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.31□□□□□ -2.04
APOBP04114 AC009852.2-201ENST00000567898 485 ntBASIC2.31□□□□□ -2.04
APOBP04114 AL451044.1-201ENST00000604867 238 ntBASIC2.31□□□□□ -2.04
APOBP04114 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
APOBP04114 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
APOBP04114 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
APOBP04114 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
APOBP04114 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
APOBP04114 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
APOBP04114 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
APOBP04114 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
APOBP04114 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC2.31□□□□□ -2.04
APOBP04114 RPL36AP10-201ENST00000421785 322 ntBASIC2.31□□□□□ -2.04
APOBP04114 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.31□□□□□ -2.04
APOBP04114 SKP1P3-201ENST00000429280 487 ntBASIC2.31□□□□□ -2.04
APOBP04114 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
APOBP04114 RPL21P10-201ENST00000463521 490 ntBASIC2.31□□□□□ -2.04
APOBP04114 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC2.31□□□□□ -2.04
APOBP04114 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC2.31□□□□□ -2.04
APOBP04114 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.31□□□□□ -2.04
APOBP04114 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
APOBP04114 MTCO1P24-201ENST00000515438 1558 ntBASIC2.31□□□□□ -2.04
APOBP04114 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
APOBP04114 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC2.31□□□□□ -2.04
APOBP04114 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
APOBP04114 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
APOBP04114 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC2.31□□□□□ -2.04
APOBP04114 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
APOBP04114 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
APOBP04114 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC2.31□□□□□ -2.04
APOBP04114 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
APOBP04114 MIR449A-201ENST00000362113 91 ntBASIC2.31□□□□□ -2.04
APOBP04114 SNORD9-201ENST00000362566 104 ntBASIC2.31□□□□□ -2.04
APOBP04114 RPL23AP69-201ENST00000431134 458 ntBASIC2.31□□□□□ -2.04
APOBP04114 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
APOBP04114 AC011611.1-201ENST00000552179 197 ntBASIC2.31□□□□□ -2.04
APOBP04114 EIF5A2P1-201ENST00000564027 460 ntBASIC2.31□□□□□ -2.04
APOBP04114 AC104662.1-201ENST00000604448 511 ntBASIC2.31□□□□□ -2.04
APOBP04114 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
APOBP04114 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
APOBP04114 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC2.31□□□□□ -2.04
APOBP04114 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
APOBP04114 LINC01109-201ENST00000603837 3081 ntBASIC2.31□□□□□ -2.04
APOBP04114 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
APOBP04114 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
APOBP04114 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
APOBP04114 RNU1-70P-201ENST00000362618 164 ntBASIC2.3□□□□□ -2.04
APOBP04114 MTHFD2P2-201ENST00000407725 247 ntBASIC2.3□□□□□ -2.04
APOBP04114 MIR1271-201ENST00000408537 86 ntBASIC2.3□□□□□ -2.04
APOBP04114 OOSP1P1-201ENST00000423265 274 ntBASIC2.3□□□□□ -2.04
APOBP04114 AC107083.1-201ENST00000439643 279 ntBASIC2.3□□□□□ -2.04
APOBP04114 SETD6P1-201ENST00000444575 317 ntBASIC2.3□□□□□ -2.04
APOBP04114 MTND6P32-201ENST00000457611 483 ntBASIC2.3□□□□□ -2.04
APOBP04114 AL591473.1-201ENST00000464297 313 ntBASIC2.3□□□□□ -2.04
APOBP04114 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.3□□□□□ -2.04
APOBP04114 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC2.3□□□□□ -2.04
APOBP04114 AC027309.2-201ENST00000520566 192 ntBASIC2.3□□□□□ -2.04
APOBP04114 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
APOBP04114 MIR5186-201ENST00000577504 120 ntBASIC2.3□□□□□ -2.04
APOBP04114 AC016839.1-201ENST00000578162 867 ntBASIC2.3□□□□□ -2.04
APOBP04114 AL354976.1-201ENST00000613843 387 ntBASIC2.3□□□□□ -2.04
APOBP04114 AC009464.1-201ENST00000615731 469 ntBASIC2.3□□□□□ -2.04
APOBP04114 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC2.3□□□□□ -2.04
APOBP04114 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC2.3□□□□□ -2.04
APOBP04114 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
APOBP04114 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
APOBP04114 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
APOBP04114 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
APOBP04114 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
APOBP04114 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
APOBP04114 AC119744.1-201ENST00000454746 1715 ntBASIC2.3□□□□□ -2.04
APOBP04114 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC2.3□□□□□ -2.04
APOBP04114 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
APOBP04114 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
APOBP04114 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
APOBP04114 OR10J6P-201ENST00000289731 930 ntBASIC2.3□□□□□ -2.04
APOBP04114 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
APOBP04114 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
APOBP04114 AL136131.1-201ENST00000406079 803 ntBASIC2.3□□□□□ -2.04
APOBP04114 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.3□□□□□ -2.04
APOBP04114 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.3□□□□□ -2.04
APOBP04114 NPM1P28-201ENST00000492269 840 ntBASIC2.3□□□□□ -2.04
APOBP04114 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC2.3□□□□□ -2.04
APOBP04114 AC023509.5-201ENST00000617434 807 ntBASIC2.3□□□□□ -2.04
APOBP04114 U4.6-201ENST00000621618 127 ntBASIC2.3□□□□□ -2.04
APOBP04114 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.3□□□□□ -2.04
APOBP04114 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
APOBP04114 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
APOBP04114 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
APOBP04114 SPATA31D2P-201ENST00000429999 4388 ntBASIC2.3□□□□□ -2.04
APOBP04114 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
APOBP04114 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
APOBP04114 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
APOBP04114 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms