Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AC134882.1-201ENST00000603738 1676 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 REL-201ENST00000295025 11255 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AF127577.6-201ENST00000623352 2191 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AL391417.1-201ENST00000404100 426 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 snoU13.18-201ENST00000459483 104 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 RN7SL371P-201ENST00000578099 267 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 AC008669.1-201ENST00000565823 2178 ntBASIC1.6□□□□□ -2.15
MACF1Q9UPN3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC1.6□□□□□ -2.15
MACF1Q9UPN3 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 ZNF37BP-202ENST00000452075 8637 ntTSL 2 BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 RNU6-582P-201ENST00000362989 107 ntBASIC1.59□□□□□ -2.15
MACF1Q9UPN3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 RPL12P9-201ENST00000412942 488 ntBASIC1.59□□□□□ -2.15
MACF1Q9UPN3 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 AC015912.2-201ENST00000571053 181 ntBASIC1.59□□□□□ -2.15
MACF1Q9UPN3 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 MIR448-201ENST00000362131 111 ntBASIC1.59□□□□□ -2.15
MACF1Q9UPN3 RPL6P21-201ENST00000418672 846 ntBASIC1.59□□□□□ -2.15
MACF1Q9UPN3 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 AC010374.2-201ENST00000512933 535 ntBASIC1.59□□□□□ -2.15
MACF1Q9UPN3 AC090181.2-201ENST00000602975 672 ntBASIC1.59□□□□□ -2.15
MACF1Q9UPN3 AC010591.1-201ENST00000603941 649 ntBASIC1.59□□□□□ -2.15
MACF1Q9UPN3 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 AL672167.1-203ENST00000641299 2975 ntBASIC1.59□□□□□ -2.15
MACF1Q9UPN3 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 OR5J1P-201ENST00000313544 939 ntBASIC1.59□□□□□ -2.15
MACF1Q9UPN3 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 U3.19-201ENST00000390893 196 ntBASIC1.59□□□□□ -2.15
MACF1Q9UPN3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 PTGES3P3-201ENST00000511479 482 ntBASIC1.59□□□□□ -2.15
MACF1Q9UPN3 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 AC018695.5-201ENST00000605872 315 ntBASIC1.59□□□□□ -2.15
MACF1Q9UPN3 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC1.59□□□□□ -2.15
MACF1Q9UPN3 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 AC073530.2-201ENST00000623987 261 ntBASIC1.59□□□□□ -2.16
MACF1Q9UPN3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 MIR1289-2-201ENST00000408360 111 ntBASIC1.59□□□□□ -2.16
MACF1Q9UPN3 PGBD4P8-201ENST00000412993 562 ntBASIC1.59□□□□□ -2.16
MACF1Q9UPN3 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 RPF2P1-201ENST00000424137 906 ntBASIC1.59□□□□□ -2.16
MACF1Q9UPN3 CBX1P4-201ENST00000439415 457 ntBASIC1.59□□□□□ -2.16
MACF1Q9UPN3 RPSAP41-201ENST00000439695 860 ntBASIC1.59□□□□□ -2.16
MACF1Q9UPN3 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 PHBP17-201ENST00000528576 541 ntBASIC1.59□□□□□ -2.16
MACF1Q9UPN3 AC022655.2-201ENST00000577280 318 ntBASIC1.59□□□□□ -2.16
MACF1Q9UPN3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC1.59□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms