Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5□□□□□ -1.61
RLIMQ9NVW2 RPS4XP15-201ENST00000489210 795 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 AC108078.3-201ENST00000502633 489 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 MTCYBP17-201ENST00000503579 789 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 AL117351.2-201ENST00000513571 157 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5□□□□□ -1.61
RLIMQ9NVW2 AC022447.1-201ENST00000515358 464 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5□□□□□ -1.61
RLIMQ9NVW2 AC027309.2-201ENST00000520566 192 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5□□□□□ -1.61
RLIMQ9NVW2 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5□□□□□ -1.61
RLIMQ9NVW2 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5□□□□□ -1.61
RLIMQ9NVW2 SERPINE4P-201ENST00000554978 281 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 AC040958.1-201ENST00000561102 201 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5□□□□□ -1.61
RLIMQ9NVW2 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5□□□□□ -1.61
RLIMQ9NVW2 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5□□□□□ -1.61
RLIMQ9NVW2 AC008759.1-201ENST00000589783 983 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5□□□□□ -1.61
RLIMQ9NVW2 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5□□□□□ -1.61
RLIMQ9NVW2 LSM1P2-201ENST00000604911 322 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 AC239868.4-201ENST00000608318 671 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 AC106028.5-201ENST00000610332 395 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 AC244107.2-201ENST00000611773 76 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5□□□□□ -1.61
RLIMQ9NVW2 AC007204.2-201ENST00000615022 616 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5□□□□□ -1.61
RLIMQ9NVW2 AC026634.1-201ENST00000634369 198 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 MIR1910-201ENST00000636955 80 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
RLIMQ9NVW2 OR13C1P-202ENST00000641378 2919 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5□□□□□ -1.61
RLIMQ9NVW2 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5□□□□□ -1.61
RLIMQ9NVW2 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5□□□□□ -1.61
RLIMQ9NVW2 AL450345.1-202ENST00000605741 3881 ntBASIC5□□□□□ -1.61
RLIMQ9NVW2 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RLIMQ9NVW2 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5□□□□□ -1.61
RLIMQ9NVW2 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
RLIMQ9NVW2 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
RLIMQ9NVW2 MTCO1P14-201ENST00000441695 1559 ntBASIC4.99□□□□□ -1.61
RLIMQ9NVW2 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 RNU4-21P-201ENST00000362802 126 ntBASIC4.99□□□□□ -1.61
RLIMQ9NVW2 RNU4-2-201ENST00000365668 141 ntBASIC4.99□□□□□ -1.61
RLIMQ9NVW2 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 MTCO3P31-201ENST00000405526 789 ntBASIC4.99□□□□□ -1.61
RLIMQ9NVW2 Y_RNA.599-201ENST00000410489 109 ntBASIC4.99□□□□□ -1.61
RLIMQ9NVW2 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 COX5BP7-201ENST00000414780 274 ntBASIC4.99□□□□□ -1.61
RLIMQ9NVW2 RBMY2KP-201ENST00000418221 992 ntBASIC4.99□□□□□ -1.61
RLIMQ9NVW2 AC092647.1-201ENST00000420654 287 ntBASIC4.99□□□□□ -1.61
RLIMQ9NVW2 NPM1P24-201ENST00000428039 894 ntBASIC4.99□□□□□ -1.61
RLIMQ9NVW2 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 AC064862.4-201ENST00000442180 334 ntBASIC4.99□□□□□ -1.61
RLIMQ9NVW2 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 RPL15P21-201ENST00000495592 567 ntBASIC4.99□□□□□ -1.61
RLIMQ9NVW2 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.99□□□□□ -1.61
RLIMQ9NVW2 MYL12BP2-201ENST00000503948 512 ntBASIC4.99□□□□□ -1.61
RLIMQ9NVW2 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 AC008507.1-201ENST00000587506 734 ntBASIC4.99□□□□□ -1.61
RLIMQ9NVW2 VN1R92P-201ENST00000598511 928 ntBASIC4.99□□□□□ -1.61
RLIMQ9NVW2 AC024560.3-201ENST00000608482 349 ntBASIC4.99□□□□□ -1.61
RLIMQ9NVW2 AC104073.3-201ENST00000610942 955 ntBASIC4.99□□□□□ -1.61
RLIMQ9NVW2 AC132068.1-201ENST00000623805 459 ntBASIC4.99□□□□□ -1.61
RLIMQ9NVW2 CU639417.4-201ENST00000623928 207 ntBASIC4.99□□□□□ -1.61
RLIMQ9NVW2 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 MTND4P4-201ENST00000439033 1366 ntBASIC4.99□□□□□ -1.61
RLIMQ9NVW2 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.99□□□□□ -1.61
RLIMQ9NVW2 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 AC025125.1-201ENST00000624743 1922 ntBASIC4.99□□□□□ -1.61
RLIMQ9NVW2 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RLIMQ9NVW2 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 MTCO1P7-201ENST00000419523 1542 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RLIMQ9NVW2 RNU6-657P-201ENST00000383904 107 ntBASIC4.98□□□□□ -1.61
RLIMQ9NVW2 RNA5SP122-201ENST00000384457 108 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms