Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 TMPRSS7-203ENST00000452346 2616 ntTSL 5 BASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 FSD2-201ENST00000334574 6418 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 ANO5-201ENST00000324559 6651 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 CU633906.2-201ENST00000624576 2257 ntTSL 5 BASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 RUBCN-201ENST00000273582 6955 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 GPR107-203ENST00000372410 6991 ntTSL 5 BASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 AC016588.2-201ENST00000632484 3021 ntBASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 ZNF512-204ENST00000416005 3515 ntTSL 2 BASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 SPATA31D3-201ENST00000445385 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 ZNF691-205ENST00000372507 1683 ntAPPRIS P3 TSL 3 BASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 SLC6A4-203ENST00000401766 6543 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 VCPIP1-201ENST00000310421 9942 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 PCDH11Y-207ENST00000622698 4824 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 AC018628.1-201ENST00000624147 3819 ntBASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 AP3M1-202ENST00000372745 2320 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 GLRA1-201ENST00000274576 1803 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 BARD1-213ENST00000619009 3967 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 FAM214A-208ENST00000562351 2993 ntTSL 5 BASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 PDE4DIP-237ENST00000585156 8439 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 NEXMIF-201ENST00000055682 11719 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 LRRC37A3-201ENST00000319651 5537 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
KRTAP3-3Q9BYR6 MCOLN2-202ENST00000370608 2871 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 PDCD11-201ENST00000369797 6453 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 APOL1-201ENST00000319136 3000 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 KIAA1644-201ENST00000381176 6751 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 C8orf44-SGK3-201ENST00000519289 2949 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 NCAM1-225ENST00000618266 5937 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 AC108058.1-201ENST00000457290 2044 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 OGDHL-201ENST00000374103 3704 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 CUL5-201ENST00000393094 6351 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 AFF1-202ENST00000395146 9285 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 CORIN-208ENST00000508498 3200 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 FMO5-202ENST00000369272 2168 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 FBXW7-205ENST00000603548 2562 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 PNPT1-205ENST00000447944 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 KIAA1257-201ENST00000265068 6034 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 RTTN-202ENST00000578780 2333 ntTSL 5 BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 AC010329.2-201ENST00000595195 2737 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 KPNA3-201ENST00000261667 4474 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 AC008163.1-202ENST00000636004 2889 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 MAPK10-274ENST00000641120 2456 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 LINC01838-201ENST00000595783 1657 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 SNORD115-27-201ENST00000364430 82 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 RN7SKP246-201ENST00000364553 317 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 CCL21-202ENST00000378792 599 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 RNU6-649P-201ENST00000384463 107 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 AC009804.1-201ENST00000400949 179 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 RNA5SP390-201ENST00000410191 113 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 AL354707.2-201ENST00000412339 422 ntTSL 2 BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 AC017078.1-201ENST00000416146 368 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 FDPSP6-201ENST00000425091 512 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 AC063976.3-201ENST00000426849 329 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 PGAM1P2-201ENST00000436071 725 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 OR6L1P-201ENST00000441446 910 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 AC125238.1-201ENST00000448842 249 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 AC245102.2-201ENST00000448956 180 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 FO393401.2-202ENST00000450773 541 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 RNU1-131P-201ENST00000458943 161 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 RN7SL526P-201ENST00000469492 319 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 RN7SL738P-201ENST00000470264 297 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 RN7SL340P-201ENST00000470792 296 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 MT1DP-202ENST00000486551 150 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 GUSBP2-203ENST00000492832 801 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 AC091940.1-201ENST00000515519 756 ntTSL 5 BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 HOXA-AS2-205ENST00000518088 509 ntTSL 3 BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 AC107934.2-201ENST00000518653 310 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 CSRP1-209ENST00000526723 574 ntTSL 3 BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 AC073578.1-201ENST00000535133 493 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 PCED1B-AS1-206ENST00000550426 683 ntTSL 5 BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 AC120114.5-201ENST00000562285 556 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 STX1B-202ENST00000565419 834 ntTSL 2 BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 MIR3683-201ENST00000580847 82 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 SNORD84-203ENST00000584275 78 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 FXYD5-210ENST00000588699 927 ntTSL 5 BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 TMEM147-AS1-204ENST00000590125 698 ntTSL 3 BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 PPY-205ENST00000591228 499 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 AC022031.2-201ENST00000592936 555 ntTSL 4 BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 IGKV2OR2-7-201ENST00000604652 304 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 AC091979.2-201ENST00000607514 214 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 AC126915.2-201ENST00000610957 190 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.94□□□□□ -1.62
KRTAP3-3Q9BYR6 AC244472.4-201ENST00000616518 421 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 220.5 ms