Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 SNRPCP2-201ENST00000504370 475 ntBASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 AC147055.4-201ENST00000504399 745 ntBASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 AC111000.2-201ENST00000507775 550 ntBASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 HMGB1P44-201ENST00000508597 572 ntBASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 OR5BM1P-201ENST00000512021 366 ntBASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 RNU6-678P-201ENST00000516832 109 ntBASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 HMGB1P40-201ENST00000525121 540 ntBASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 SLC2A13P1-201ENST00000531560 322 ntBASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 AC109583.2-201ENST00000617367 129 ntBASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 MIR6864-201ENST00000617935 70 ntBASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 AC120349.2-201ENST00000625002 298 ntBASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 AL513185.3-201ENST00000433335 1300 ntBASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 AC023421.1-201ENST00000590535 1785 ntBASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC144BQ3MJ40 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 AC010266.2-201ENST00000564741 3255 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 AL031119.1-201ENST00000404707 1879 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 RNU6-1122P-201ENST00000384449 107 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 RNU6-253P-201ENST00000384730 105 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 DUTP5-201ENST00000406790 469 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 Y_RNA.625-201ENST00000411256 107 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 SETP15-201ENST00000412724 337 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 AC007161.1-204ENST00000423039 460 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 SRSF1P1-201ENST00000424058 520 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 AL158073.1-201ENST00000426848 1104 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 RPS25P9-201ENST00000435591 252 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 AL445567.1-201ENST00000439121 144 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 MTND2P20-201ENST00000440805 661 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 SYPL1P1-201ENST00000473622 768 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 RAD51AP1P1-201ENST00000484195 1001 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 NCOR1P1-202ENST00000486162 291 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 HMGB1P28-201ENST00000507778 552 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 AC135279.1-201ENST00000543493 504 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 LSM3P2-201ENST00000551246 273 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 EIF5A2P1-201ENST00000564027 460 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 MIR4646-201ENST00000580775 63 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 AP005262.1-201ENST00000582646 997 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 AC006116.3-201ENST00000592968 361 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 AL163642.2-201ENST00000604722 1019 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 AC064807.4-201ENST00000607201 407 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 AL359535.1-201ENST00000612100 1087 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 AC092650.2-201ENST00000619984 902 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 AC015908.5-201ENST00000623289 343 ntBASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC144BQ3MJ40 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CCDC144BQ3MJ40 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC144BQ3MJ40 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC144BQ3MJ40 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC144BQ3MJ40 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC144BQ3MJ40 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms