Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC134882.1-201ENST00000603738 1676 ntBASIC4.44□□□□□ -1.7
TPM4P67936 CEP170P1-201ENST00000502249 4587 ntBASIC4.44□□□□□ -1.7
TPM4P67936 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TPM4P67936 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TPM4P67936 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.43□□□□□ -1.7
TPM4P67936 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TPM4P67936 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
TPM4P67936 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TPM4P67936 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.43□□□□□ -1.7
TPM4P67936 RPL23AP1-201ENST00000428990 471 ntBASIC4.43□□□□□ -1.7
TPM4P67936 RPS3AP54-201ENST00000435535 734 ntBASIC4.43□□□□□ -1.7
TPM4P67936 AL513533.1-201ENST00000453728 415 ntBASIC4.43□□□□□ -1.7
TPM4P67936 RPL7AP52-201ENST00000458096 790 ntBASIC4.43□□□□□ -1.7
TPM4P67936 PPIAP15-201ENST00000479662 484 ntBASIC4.43□□□□□ -1.7
TPM4P67936 AC105233.1-201ENST00000498840 781 ntBASIC4.43□□□□□ -1.7
TPM4P67936 RN7SKP92-201ENST00000517266 244 ntBASIC4.43□□□□□ -1.7
TPM4P67936 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.43□□□□□ -1.7
TPM4P67936 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.43□□□□□ -1.7
TPM4P67936 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.43□□□□□ -1.7
TPM4P67936 AC069366.1-201ENST00000583159 838 ntBASIC4.43□□□□□ -1.7
TPM4P67936 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
TPM4P67936 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.43□□□□□ -1.7
TPM4P67936 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TPM4P67936 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TPM4P67936 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TPM4P67936 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
TPM4P67936 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.42□□□□□ -1.7
TPM4P67936 AC009951.1-201ENST00000623674 2614 ntBASIC4.42□□□□□ -1.7
TPM4P67936 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.42□□□□□ -1.7
TPM4P67936 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.42□□□□□ -1.7
TPM4P67936 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TPM4P67936 AC022893.2-201ENST00000564832 3296 ntBASIC4.42□□□□□ -1.7
TPM4P67936 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.42□□□□□ -1.7
TPM4P67936 HMGB3P19-201ENST00000403971 560 ntBASIC4.42□□□□□ -1.7
TPM4P67936 RPS16P5-201ENST00000406501 404 ntBASIC4.42□□□□□ -1.7
TPM4P67936 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.42□□□□□ -1.7
TPM4P67936 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.42□□□□□ -1.7
TPM4P67936 RPS29P17-201ENST00000430795 166 ntBASIC4.42□□□□□ -1.7
TPM4P67936 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TPM4P67936 TXNP2-201ENST00000443918 295 ntBASIC4.42□□□□□ -1.7
TPM4P67936 RPL7P31-201ENST00000450192 724 ntBASIC4.42□□□□□ -1.7
TPM4P67936 AC098824.1-201ENST00000453565 980 ntBASIC4.42□□□□□ -1.7
TPM4P67936 AC069277.2-201ENST00000454211 432 ntBASIC4.42□□□□□ -1.7
TPM4P67936 RPL23AP24-201ENST00000458203 385 ntBASIC4.42□□□□□ -1.7
TPM4P67936 AC074386.1-201ENST00000476560 767 ntBASIC4.42□□□□□ -1.7
TPM4P67936 RPL7P24-201ENST00000493052 752 ntBASIC4.42□□□□□ -1.7
TPM4P67936 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TPM4P67936 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.42□□□□□ -1.7
TPM4P67936 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.42□□□□□ -1.7
TPM4P67936 RNU6-347P-201ENST00000516658 105 ntBASIC4.42□□□□□ -1.7
TPM4P67936 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.42□□□□□ -1.7
TPM4P67936 IGHV3-32-201ENST00000519182 355 ntBASIC4.42□□□□□ -1.7
TPM4P67936 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TPM4P67936 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.42□□□□□ -1.7
TPM4P67936 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.42□□□□□ -1.7
TPM4P67936 AC006504.1-201ENST00000562493 3666 ntBASIC4.42□□□□□ -1.7
TPM4P67936 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.42□□□□□ -1.7
TPM4P67936 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TPM4P67936 AC020915.5-201ENST00000596836 964 ntBASIC4.42□□□□□ -1.7
TPM4P67936 AL161729.3-201ENST00000603533 673 ntBASIC4.42□□□□□ -1.7
TPM4P67936 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.42□□□□□ -1.7
TPM4P67936 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.42□□□□□ -1.7
TPM4P67936 AC016252.1-201ENST00000609721 474 ntBASIC4.42□□□□□ -1.7
TPM4P67936 uc_338.32-201ENST00000615087 172 ntBASIC4.42□□□□□ -1.7
TPM4P67936 AC091905.1-201ENST00000624400 311 ntBASIC4.42□□□□□ -1.7
TPM4P67936 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.42□□□□□ -1.7
TPM4P67936 PNPT1P2-201ENST00000456768 2050 ntBASIC4.42□□□□□ -1.7
TPM4P67936 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.42□□□□□ -1.7
TPM4P67936 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TPM4P67936 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.42□□□□□ -1.7
TPM4P67936 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
TPM4P67936 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
TPM4P67936 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.42□□□□□ -1.7
TPM4P67936 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.41□□□□□ -1.7
TPM4P67936 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
TPM4P67936 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TPM4P67936 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TPM4P67936 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.41□□□□□ -1.7
TPM4P67936 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.41□□□□□ -1.7
TPM4P67936 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.41□□□□□ -1.7
TPM4P67936 HSPE1P8-201ENST00000406997 288 ntBASIC4.41□□□□□ -1.7
TPM4P67936 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.41□□□□□ -1.7
TPM4P67936 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.41□□□□□ -1.7
TPM4P67936 AL138785.1-201ENST00000425821 331 ntBASIC4.41□□□□□ -1.7
TPM4P67936 HMGB3P21-201ENST00000452483 547 ntBASIC4.41□□□□□ -1.7
TPM4P67936 MTCO3P16-201ENST00000454456 754 ntBASIC4.41□□□□□ -1.7
TPM4P67936 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.41□□□□□ -1.7
TPM4P67936 RN7SL604P-201ENST00000492589 296 ntBASIC4.41□□□□□ -1.7
TPM4P67936 AK3P4-201ENST00000504283 583 ntBASIC4.41□□□□□ -1.7
TPM4P67936 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.41□□□□□ -1.7
TPM4P67936 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.41□□□□□ -1.7
TPM4P67936 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.41□□□□□ -1.7
TPM4P67936 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.41□□□□□ -1.7
TPM4P67936 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.41□□□□□ -1.7
TPM4P67936 BRDTP1-201ENST00000605735 677 ntBASIC4.41□□□□□ -1.7
TPM4P67936 AC034236.3-201ENST00000605999 461 ntBASIC4.41□□□□□ -1.7
TPM4P67936 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.41□□□□□ -1.7
TPM4P67936 OR6R2P-201ENST00000609216 300 ntBASIC4.41□□□□□ -1.7
TPM4P67936 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TPM4P67936 AL137100.1-201ENST00000556703 1620 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms