Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
BRCA2P51587 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
BRCA2P51587 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC4.04□□□□□ -1.76
BRCA2P51587 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
BRCA2P51587 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
BRCA2P51587 SNORA44-201ENST00000384584 132 ntBASIC4.04□□□□□ -1.76
BRCA2P51587 SUMO2P19-201ENST00000518920 295 ntBASIC4.04□□□□□ -1.76
BRCA2P51587 CYCSP28-201ENST00000534284 321 ntBASIC4.04□□□□□ -1.76
BRCA2P51587 AC127024.5-201ENST00000580085 462 ntBASIC4.04□□□□□ -1.76
BRCA2P51587 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.04□□□□□ -1.76
BRCA2P51587 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.04□□□□□ -1.76
BRCA2P51587 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
BRCA2P51587 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.04□□□□□ -1.76
BRCA2P51587 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
BRCA2P51587 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
BRCA2P51587 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.04□□□□□ -1.76
BRCA2P51587 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
BRCA2P51587 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
BRCA2P51587 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.04□□□□□ -1.76
BRCA2P51587 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.04□□□□□ -1.76
BRCA2P51587 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.04□□□□□ -1.76
BRCA2P51587 RNA5SP341-201ENST00000516261 117 ntBASIC4.04□□□□□ -1.76
BRCA2P51587 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.04□□□□□ -1.76
BRCA2P51587 AC009464.1-201ENST00000615731 469 ntBASIC4.04□□□□□ -1.76
BRCA2P51587 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
BRCA2P51587 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
BRCA2P51587 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
BRCA2P51587 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.04□□□□□ -1.76
BRCA2P51587 SAMMSON-213ENST00000641336 1521 ntBASIC4.03□□□□□ -1.76
BRCA2P51587 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
BRCA2P51587 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.03□□□□□ -1.76
BRCA2P51587 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
BRCA2P51587 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
BRCA2P51587 LIPT1P1-201ENST00000415870 1186 ntBASIC4.03□□□□□ -1.76
BRCA2P51587 BX276092.4-201ENST00000452056 248 ntBASIC4.03□□□□□ -1.76
BRCA2P51587 OR5M7P-201ENST00000526140 972 ntBASIC4.03□□□□□ -1.76
BRCA2P51587 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.03□□□□□ -1.76
BRCA2P51587 AL354760.1-201ENST00000608357 643 ntBASIC4.03□□□□□ -1.76
BRCA2P51587 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
BRCA2P51587 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
BRCA2P51587 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC4.03□□□□□ -1.76
BRCA2P51587 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
BRCA2P51587 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
BRCA2P51587 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
BRCA2P51587 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
BRCA2P51587 RPL5P12-201ENST00000477071 851 ntBASIC4.03□□□□□ -1.76
BRCA2P51587 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.03□□□□□ -1.76
BRCA2P51587 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.03□□□□□ -1.76
BRCA2P51587 AC093732.2-201ENST00000607950 274 ntBASIC4.03□□□□□ -1.76
BRCA2P51587 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC4.03□□□□□ -1.76
BRCA2P51587 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.03□□□□□ -1.76
BRCA2P51587 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.77
BRCA2P51587 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
BRCA2P51587 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.02□□□□□ -1.77
BRCA2P51587 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
BRCA2P51587 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.02□□□□□ -1.77
BRCA2P51587 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
BRCA2P51587 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
BRCA2P51587 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
BRCA2P51587 AL136131.1-201ENST00000406079 803 ntBASIC4.02□□□□□ -1.77
BRCA2P51587 RPL5P2-201ENST00000429598 854 ntBASIC4.02□□□□□ -1.77
BRCA2P51587 STMN1P2-201ENST00000508435 439 ntBASIC4.02□□□□□ -1.77
BRCA2P51587 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.02□□□□□ -1.77
BRCA2P51587 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
BRCA2P51587 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
BRCA2P51587 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
BRCA2P51587 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
BRCA2P51587 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
BRCA2P51587 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
BRCA2P51587 NANOGNBP1-201ENST00000448444 480 ntBASIC4.02□□□□□ -1.77
BRCA2P51587 RPL7P48-201ENST00000461513 746 ntBASIC4.02□□□□□ -1.77
BRCA2P51587 AC093755.1-201ENST00000512950 1023 ntBASIC4.02□□□□□ -1.77
BRCA2P51587 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.02□□□□□ -1.77
BRCA2P51587 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
BRCA2P51587 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
BRCA2P51587 AC093849.1-201ENST00000563631 2209 ntBASIC4.01□□□□□ -1.77
BRCA2P51587 ZNF807-201ENST00000328088 1707 ntBASIC4.01□□□□□ -1.77
BRCA2P51587 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BRCA2P51587 RNU4-82P-201ENST00000362443 140 ntBASIC4.01□□□□□ -1.77
BRCA2P51587 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.01□□□□□ -1.77
BRCA2P51587 RPS15AP29-201ENST00000445539 400 ntBASIC4.01□□□□□ -1.77
BRCA2P51587 AC103881.1-201ENST00000603476 538 ntBASIC4.01□□□□□ -1.77
BRCA2P51587 AC124312.4-201ENST00000605533 310 ntBASIC4.01□□□□□ -1.77
BRCA2P51587 AC112503.1-201ENST00000608436 391 ntBASIC4.01□□□□□ -1.77
BRCA2P51587 AC026422.1-201ENST00000623961 452 ntBASIC4.01□□□□□ -1.77
BRCA2P51587 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BRCA2P51587 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BRCA2P51587 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BRCA2P51587 SNORA5.1-201ENST00000384275 131 ntBASIC4.01□□□□□ -1.77
BRCA2P51587 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.01□□□□□ -1.77
BRCA2P51587 FTH1P1-201ENST00000437933 532 ntBASIC4.01□□□□□ -1.77
BRCA2P51587 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.01□□□□□ -1.77
BRCA2P51587 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.01□□□□□ -1.77
BRCA2P51587 AL390816.3-201ENST00000604527 1066 ntBASIC4.01□□□□□ -1.77
BRCA2P51587 U4.6-201ENST00000621618 127 ntBASIC4.01□□□□□ -1.77
BRCA2P51587 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.01□□□□□ -1.77
BRCA2P51587 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
BRCA2P51587 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BRCA2P51587 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
BRCA2P51587 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms