Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.62□□□□□ -1.67
CENPAP49450 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CENPAP49450 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CENPAP49450 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CENPAP49450 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CENPAP49450 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CENPAP49450 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CENPAP49450 RNA5SP90-201ENST00000364801 99 ntBASIC4.62□□□□□ -1.67
CENPAP49450 MIR600-201ENST00000385007 98 ntBASIC4.62□□□□□ -1.67
CENPAP49450 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CENPAP49450 ERHP2-201ENST00000402323 299 ntBASIC4.62□□□□□ -1.67
CENPAP49450 AL078604.1-201ENST00000404609 466 ntBASIC4.62□□□□□ -1.67
CENPAP49450 NUDT19P3-201ENST00000404698 555 ntBASIC4.62□□□□□ -1.67
CENPAP49450 RNU6-575P-201ENST00000411326 105 ntBASIC4.62□□□□□ -1.67
CENPAP49450 RN7SKP293-201ENST00000411389 296 ntBASIC4.62□□□□□ -1.67
CENPAP49450 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.62□□□□□ -1.67
CENPAP49450 AL008987.1-201ENST00000415528 237 ntBASIC4.62□□□□□ -1.67
CENPAP49450 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.62□□□□□ -1.67
CENPAP49450 AC234782.4-201ENST00000417646 1048 ntBASIC4.62□□□□□ -1.67
CENPAP49450 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.62□□□□□ -1.67
CENPAP49450 MTCO1P3-201ENST00000429327 192 ntBASIC4.62□□□□□ -1.67
CENPAP49450 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CENPAP49450 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.62□□□□□ -1.67
CENPAP49450 CYCSP12-201ENST00000437729 300 ntBASIC4.62□□□□□ -1.67
CENPAP49450 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.62□□□□□ -1.67
CENPAP49450 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.62□□□□□ -1.67
CENPAP49450 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.62□□□□□ -1.67
CENPAP49450 TPMTP4-201ENST00000450749 678 ntBASIC4.62□□□□□ -1.67
CENPAP49450 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.62□□□□□ -1.67
CENPAP49450 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.62□□□□□ -1.67
CENPAP49450 VN1R40P-201ENST00000455196 941 ntBASIC4.62□□□□□ -1.67
CENPAP49450 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.62□□□□□ -1.67
CENPAP49450 AC004263.1-201ENST00000479327 332 ntBASIC4.62□□□□□ -1.67
CENPAP49450 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.62□□□□□ -1.67
CENPAP49450 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.62□□□□□ -1.67
CENPAP49450 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.62□□□□□ -1.67
CENPAP49450 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CENPAP49450 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.62□□□□□ -1.67
CENPAP49450 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.62□□□□□ -1.67
CENPAP49450 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.62□□□□□ -1.67
CENPAP49450 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.62□□□□□ -1.67
CENPAP49450 AP001636.2-201ENST00000525517 696 ntBASIC4.62□□□□□ -1.67
CENPAP49450 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CENPAP49450 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.62□□□□□ -1.67
CENPAP49450 BNIP3P1-201ENST00000547295 580 ntBASIC4.62□□□□□ -1.67
CENPAP49450 NDUFB4P11-201ENST00000560510 395 ntBASIC4.62□□□□□ -1.67
CENPAP49450 BPTFP1-201ENST00000579209 492 ntBASIC4.62□□□□□ -1.67
CENPAP49450 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.62□□□□□ -1.67
CENPAP49450 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.62□□□□□ -1.67
CENPAP49450 HMGB2P1-201ENST00000591146 634 ntBASIC4.62□□□□□ -1.67
CENPAP49450 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.62□□□□□ -1.67
CENPAP49450 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.62□□□□□ -1.67
CENPAP49450 AC092954.1-201ENST00000609121 445 ntBASIC4.62□□□□□ -1.67
CENPAP49450 TUSC7.1-201ENST00000610969 165 ntBASIC4.62□□□□□ -1.67
CENPAP49450 AC079416.3-201ENST00000624479 549 ntBASIC4.62□□□□□ -1.67
CENPAP49450 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CENPAP49450 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.62□□□□□ -1.67
CENPAP49450 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CENPAP49450 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CENPAP49450 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CENPAP49450 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CENPAP49450 AL136964.1-201ENST00000622038 2990 ntBASIC4.62□□□□□ -1.67
CENPAP49450 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
CENPAP49450 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CENPAP49450 AC119744.1-201ENST00000454746 1715 ntBASIC4.61□□□□□ -1.67
CENPAP49450 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.61□□□□□ -1.67
CENPAP49450 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.61□□□□□ -1.67
CENPAP49450 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.61□□□□□ -1.67
CENPAP49450 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.61□□□□□ -1.67
CENPAP49450 RNU1-94P-201ENST00000362627 173 ntBASIC4.61□□□□□ -1.67
CENPAP49450 RN7SKP113-201ENST00000363891 295 ntBASIC4.61□□□□□ -1.67
CENPAP49450 SNORD116.1-201ENST00000365628 92 ntBASIC4.61□□□□□ -1.67
CENPAP49450 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CENPAP49450 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.61□□□□□ -1.67
CENPAP49450 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CENPAP49450 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
CENPAP49450 GSTA8P-201ENST00000404253 637 ntBASIC4.61□□□□□ -1.67
CENPAP49450 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.61□□□□□ -1.67
CENPAP49450 AL390774.1-201ENST00000411924 246 ntBASIC4.61□□□□□ -1.67
CENPAP49450 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.61□□□□□ -1.67
CENPAP49450 NANOGP4-201ENST00000427230 913 ntBASIC4.61□□□□□ -1.67
CENPAP49450 CNOT7P1-201ENST00000429006 852 ntBASIC4.61□□□□□ -1.67
CENPAP49450 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.61□□□□□ -1.67
CENPAP49450 RPL7P34-201ENST00000433316 712 ntBASIC4.61□□□□□ -1.67
CENPAP49450 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.61□□□□□ -1.67
CENPAP49450 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.61□□□□□ -1.67
CENPAP49450 TXNP5-201ENST00000441043 315 ntBASIC4.61□□□□□ -1.67
CENPAP49450 AP000281.1-201ENST00000444036 316 ntBASIC4.61□□□□□ -1.67
CENPAP49450 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CENPAP49450 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.61□□□□□ -1.67
CENPAP49450 RPL7AP28-201ENST00000464513 571 ntBASIC4.61□□□□□ -1.67
CENPAP49450 RN7SL717P-201ENST00000478343 297 ntBASIC4.61□□□□□ -1.67
CENPAP49450 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.61□□□□□ -1.67
CENPAP49450 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.61□□□□□ -1.67
CENPAP49450 GTF2F2P1-201ENST00000511083 675 ntBASIC4.61□□□□□ -1.67
CENPAP49450 AC018797.3-201ENST00000513388 1241 ntBASIC4.61□□□□□ -1.67
CENPAP49450 AC119751.5-201ENST00000514077 770 ntBASIC4.61□□□□□ -1.67
CENPAP49450 AP006245.2-201ENST00000522004 300 ntBASIC4.61□□□□□ -1.67
CENPAP49450 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.61□□□□□ -1.67
CENPAP49450 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms