Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 CTSLP6-201ENST00000458273 1002 ntBASIC8.35□□□□□ -1.07
CD44P16070 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC8.35□□□□□ -1.07
CD44P16070 AC100823.2-201ENST00000518337 699 ntBASIC8.35□□□□□ -1.07
CD44P16070 AF279873.1-201ENST00000523393 313 ntBASIC8.35□□□□□ -1.07
CD44P16070 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC8.35□□□□□ -1.07
CD44P16070 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC8.35□□□□□ -1.07
CD44P16070 AC127455.1-201ENST00000565496 145 ntBASIC8.35□□□□□ -1.07
CD44P16070 AC138749.2-201ENST00000566048 167 ntBASIC8.35□□□□□ -1.07
CD44P16070 AC003002.3-201ENST00000597410 521 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
CD44P16070 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC8.35□□□□□ -1.07
CD44P16070 AC090525.3-201ENST00000605601 189 ntBASIC8.35□□□□□ -1.07
CD44P16070 U47924.1-201ENST00000606539 434 ntBASIC8.35□□□□□ -1.07
CD44P16070 MIAT_exon1.1-201ENST00000617016 135 ntBASIC8.35□□□□□ -1.07
CD44P16070 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC8.35□□□□□ -1.07
CD44P16070 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC8.35□□□□□ -1.07
CD44P16070 RPL36AP21-202ENST00000639134 430 ntBASIC8.35□□□□□ -1.07
CD44P16070 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CD44P16070 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CD44P16070 CCDC150P1-201ENST00000537123 2215 ntBASIC8.35□□□□□ -1.07
CD44P16070 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CD44P16070 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
CD44P16070 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC8.35□□□□□ -1.07
CD44P16070 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CD44P16070 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CD44P16070 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
CD44P16070 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC8.35□□□□□ -1.07
CD44P16070 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CD44P16070 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CD44P16070 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CD44P16070 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC8.35□□□□□ -1.07
CD44P16070 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC8.35□□□□□ -1.07
CD44P16070 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC8.35□□□□□ -1.07
CD44P16070 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CD44P16070 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CD44P16070 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CD44P16070 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CD44P16070 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CD44P16070 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CD44P16070 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC8.34□□□□□ -1.07
CD44P16070 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
CD44P16070 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CD44P16070 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC8.34□□□□□ -1.07
CD44P16070 RNU6-429P-201ENST00000384582 108 ntBASIC8.34□□□□□ -1.07
CD44P16070 U3.20-201ENST00000390909 217 ntBASIC8.34□□□□□ -1.07
CD44P16070 AL033519.2-201ENST00000403958 392 ntBASIC8.34□□□□□ -1.07
CD44P16070 UBE2V1P4-201ENST00000425374 344 ntBASIC8.34□□□□□ -1.07
CD44P16070 MTCO1P39-201ENST00000426148 480 ntBASIC8.34□□□□□ -1.07
CD44P16070 MTND3P9-201ENST00000429526 346 ntBASIC8.34□□□□□ -1.07
CD44P16070 KRTAP3-4P-201ENST00000430780 280 ntBASIC8.34□□□□□ -1.07
CD44P16070 USP12-AS2-201ENST00000452222 279 ntTSL 3 BASIC8.34□□□□□ -1.07
CD44P16070 RPL10P6-201ENST00000457497 318 ntBASIC8.34□□□□□ -1.07
CD44P16070 GLRXP3-201ENST00000470810 321 ntBASIC8.34□□□□□ -1.07
CD44P16070 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC8.34□□□□□ -1.07
CD44P16070 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CD44P16070 AC068305.1-201ENST00000497406 726 ntBASIC8.34□□□□□ -1.07
CD44P16070 AC074255.1-201ENST00000511259 501 ntBASIC8.34□□□□□ -1.07
CD44P16070 Y_RNA.694-201ENST00000516677 117 ntBASIC8.34□□□□□ -1.07
CD44P16070 RNU6-1234P-201ENST00000516877 103 ntBASIC8.34□□□□□ -1.07
CD44P16070 AC084251.1-201ENST00000521867 382 ntBASIC8.34□□□□□ -1.07
CD44P16070 CYCSP27-201ENST00000527643 293 ntBASIC8.34□□□□□ -1.07
CD44P16070 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC8.34□□□□□ -1.07
CD44P16070 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC8.34□□□□□ -1.07
CD44P16070 AP004242.1-201ENST00000533701 349 ntBASIC8.34□□□□□ -1.07
CD44P16070 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC8.34□□□□□ -1.07
CD44P16070 IGHV1OR15-3-201ENST00000564926 351 ntBASIC8.34□□□□□ -1.07
CD44P16070 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC8.34□□□□□ -1.07
CD44P16070 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CD44P16070 AC093063.1-201ENST00000599317 363 ntBASIC8.34□□□□□ -1.07
CD44P16070 AC174048.1-201ENST00000603389 144 ntBASIC8.34□□□□□ -1.07
CD44P16070 MIR6745-201ENST00000612694 127 ntBASIC8.34□□□□□ -1.07
CD44P16070 MIR6761-201ENST00000617899 72 ntBASIC8.34□□□□□ -1.07
CD44P16070 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC8.34□□□□□ -1.07
CD44P16070 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
CD44P16070 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CD44P16070 AC093616.1-201ENST00000427434 2095 ntBASIC8.34□□□□□ -1.07
CD44P16070 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
CD44P16070 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CD44P16070 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
CD44P16070 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.08
CD44P16070 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
CD44P16070 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.08
CD44P16070 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CD44P16070 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC8.33□□□□□ -1.08
CD44P16070 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
CD44P16070 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CD44P16070 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CD44P16070 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC8.33□□□□□ -1.08
CD44P16070 AC007785.2-201ENST00000598627 1916 ntBASIC8.33□□□□□ -1.08
CD44P16070 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CD44P16070 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
CD44P16070 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC8.33□□□□□ -1.08
CD44P16070 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CD44P16070 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CD44P16070 Y_RNA.143-201ENST00000363520 106 ntBASIC8.33□□□□□ -1.08
CD44P16070 RNU6-290P-201ENST00000365212 101 ntBASIC8.33□□□□□ -1.08
CD44P16070 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CD44P16070 TOMM20P4-201ENST00000427861 435 ntBASIC8.33□□□□□ -1.08
CD44P16070 AC092423.1-201ENST00000430165 186 ntBASIC8.33□□□□□ -1.08
CD44P16070 ZNF33CP-201ENST00000432492 2030 ntBASIC8.33□□□□□ -1.08
CD44P16070 MTCO1P5-201ENST00000433573 344 ntBASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms