Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 MIR218-2-201ENST00000385006 110 ntBASIC4.72□□□□□ -1.65
COL2A1P02458 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL2A1P02458 AL450992.3-201ENST00000413192 568 ntBASIC4.72□□□□□ -1.65
COL2A1P02458 AP000907.1-201ENST00000428428 510 ntBASIC4.72□□□□□ -1.65
COL2A1P02458 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.72□□□□□ -1.65
COL2A1P02458 MTND3P4-201ENST00000453537 303 ntBASIC4.72□□□□□ -1.65
COL2A1P02458 U8.18-201ENST00000459285 133 ntBASIC4.72□□□□□ -1.65
COL2A1P02458 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.72□□□□□ -1.65
COL2A1P02458 AC006517.1-201ENST00000480485 328 ntBASIC4.72□□□□□ -1.65
COL2A1P02458 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.72□□□□□ -1.65
COL2A1P02458 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.72□□□□□ -1.65
COL2A1P02458 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.72□□□□□ -1.65
COL2A1P02458 AC010374.2-201ENST00000512933 535 ntBASIC4.72□□□□□ -1.65
COL2A1P02458 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL2A1P02458 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.72□□□□□ -1.65
COL2A1P02458 MTND1P8-201ENST00000571424 950 ntBASIC4.72□□□□□ -1.65
COL2A1P02458 RPL23AP87-202ENST00000573039 466 ntBASIC4.72□□□□□ -1.65
COL2A1P02458 AC090312.1-201ENST00000580637 348 ntBASIC4.72□□□□□ -1.65
COL2A1P02458 BX322635.1-201ENST00000605804 496 ntBASIC4.72□□□□□ -1.65
COL2A1P02458 MIR432-201ENST00000606207 94 ntBASIC4.72□□□□□ -1.65
COL2A1P02458 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.72□□□□□ -1.65
COL2A1P02458 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.72□□□□□ -1.65
COL2A1P02458 AL442067.2-201ENST00000614033 363 ntBASIC4.72□□□□□ -1.65
COL2A1P02458 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.72□□□□□ -1.65
COL2A1P02458 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL2A1P02458 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL2A1P02458 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL2A1P02458 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.72□□□□□ -1.65
COL2A1P02458 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL2A1P02458 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
COL2A1P02458 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL2A1P02458 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.72□□□□□ -1.65
COL2A1P02458 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.72□□□□□ -1.65
COL2A1P02458 CASC19-284ENST00000642142 1868 ntBASIC4.71□□□□□ -1.65
COL2A1P02458 AC083843.2-201ENST00000568248 6253 ntBASIC4.71□□□□□ -1.65
COL2A1P02458 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
COL2A1P02458 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
COL2A1P02458 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL2A1P02458 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL2A1P02458 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL2A1P02458 U1.1-201ENST00000384101 164 ntBASIC4.71□□□□□ -1.66
COL2A1P02458 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL2A1P02458 RN7SKP156-201ENST00000410308 342 ntBASIC4.71□□□□□ -1.66
COL2A1P02458 AC244453.4-201ENST00000419150 388 ntBASIC4.71□□□□□ -1.66
COL2A1P02458 SFR1P2-201ENST00000421841 730 ntBASIC4.71□□□□□ -1.66
COL2A1P02458 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.71□□□□□ -1.66
COL2A1P02458 GEMIN8P3-201ENST00000445417 720 ntBASIC4.71□□□□□ -1.66
COL2A1P02458 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.71□□□□□ -1.66
COL2A1P02458 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.71□□□□□ -1.66
COL2A1P02458 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.71□□□□□ -1.66
COL2A1P02458 AC118282.1-201ENST00000506408 765 ntBASIC4.71□□□□□ -1.66
COL2A1P02458 RNA5SP179-201ENST00000517284 121 ntBASIC4.71□□□□□ -1.66
COL2A1P02458 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.71□□□□□ -1.66
COL2A1P02458 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.71□□□□□ -1.66
COL2A1P02458 DUX4L52-201ENST00000549363 777 ntBASIC4.71□□□□□ -1.66
COL2A1P02458 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.71□□□□□ -1.66
COL2A1P02458 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.71□□□□□ -1.66
COL2A1P02458 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.71□□□□□ -1.66
COL2A1P02458 AC105036.1-201ENST00000566222 271 ntBASIC4.71□□□□□ -1.66
COL2A1P02458 AC012417.1-201ENST00000582307 1039 ntBASIC4.71□□□□□ -1.66
COL2A1P02458 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.71□□□□□ -1.66
COL2A1P02458 AP003117.1-201ENST00000602771 554 ntBASIC4.71□□□□□ -1.66
COL2A1P02458 AC104662.1-201ENST00000604448 511 ntBASIC4.71□□□□□ -1.66
COL2A1P02458 AL031666.3-201ENST00000609320 1006 ntBASIC4.71□□□□□ -1.66
COL2A1P02458 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.71□□□□□ -1.66
COL2A1P02458 AL391261.4-201ENST00000616012 481 ntBASIC4.71□□□□□ -1.66
COL2A1P02458 AC091948.2-201ENST00000636510 279 ntBASIC4.71□□□□□ -1.66
COL2A1P02458 AC106858.1-201ENST00000637497 429 ntBASIC4.71□□□□□ -1.66
COL2A1P02458 Z95331.1-201ENST00000623075 23112 ntBASIC4.71□□□□□ -1.66
COL2A1P02458 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.71□□□□□ -1.66
COL2A1P02458 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.71□□□□□ -1.66
COL2A1P02458 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.71□□□□□ -1.66
COL2A1P02458 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.7□□□□□ -1.66
COL2A1P02458 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
COL2A1P02458 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL2A1P02458 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.7□□□□□ -1.66
COL2A1P02458 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.7□□□□□ -1.66
COL2A1P02458 HSPE1P27-201ENST00000430808 296 ntBASIC4.7□□□□□ -1.66
COL2A1P02458 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.7□□□□□ -1.66
COL2A1P02458 RN7SL271P-201ENST00000487601 295 ntBASIC4.7□□□□□ -1.66
COL2A1P02458 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL2A1P02458 AC026427.2-201ENST00000506228 536 ntBASIC4.7□□□□□ -1.66
COL2A1P02458 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.7□□□□□ -1.66
COL2A1P02458 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.7□□□□□ -1.66
COL2A1P02458 AC009268.1-201ENST00000561352 1203 ntBASIC4.7□□□□□ -1.66
COL2A1P02458 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.7□□□□□ -1.66
COL2A1P02458 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.7□□□□□ -1.66
COL2A1P02458 AC126365.2-201ENST00000580630 379 ntBASIC4.7□□□□□ -1.66
COL2A1P02458 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.7□□□□□ -1.66
COL2A1P02458 AL451044.1-201ENST00000604867 238 ntBASIC4.7□□□□□ -1.66
COL2A1P02458 AL159169.3-201ENST00000608871 561 ntBASIC4.7□□□□□ -1.66
COL2A1P02458 AL645927.2-201ENST00000618350 349 ntBASIC4.7□□□□□ -1.66
COL2A1P02458 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.7□□□□□ -1.66
COL2A1P02458 OR6C71P-202ENST00000641886 1107 ntBASIC4.7□□□□□ -1.66
COL2A1P02458 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL2A1P02458 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
COL2A1P02458 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL2A1P02458 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL2A1P02458 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL2A1P02458 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms