Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AL591419.1-201ENST00000427423 339 ntBASIC4.69□□□□□ -1.66
COL1A1P02452 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.69□□□□□ -1.66
COL1A1P02452 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.69□□□□□ -1.66
COL1A1P02452 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.69□□□□□ -1.66
COL1A1P02452 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.69□□□□□ -1.66
COL1A1P02452 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.69□□□□□ -1.66
COL1A1P02452 RAC1P2-201ENST00000511164 579 ntBASIC4.69□□□□□ -1.66
COL1A1P02452 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL1A1P02452 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.69□□□□□ -1.66
COL1A1P02452 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.69□□□□□ -1.66
COL1A1P02452 AL596275.2-204ENST00000641628 552 ntBASIC4.69□□□□□ -1.66
COL1A1P02452 AC138627.1-204ENST00000641894 765 ntBASIC4.69□□□□□ -1.66
COL1A1P02452 AL596275.2-206ENST00000641957 626 ntBASIC4.69□□□□□ -1.66
COL1A1P02452 CASC19-284ENST00000642142 1868 ntBASIC4.68□□□□□ -1.66
COL1A1P02452 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL1A1P02452 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL1A1P02452 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL1A1P02452 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.68□□□□□ -1.66
COL1A1P02452 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL1A1P02452 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL1A1P02452 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.68□□□□□ -1.66
COL1A1P02452 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
COL1A1P02452 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
COL1A1P02452 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.68□□□□□ -1.66
COL1A1P02452 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
COL1A1P02452 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
COL1A1P02452 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.68□□□□□ -1.66
COL1A1P02452 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.68□□□□□ -1.66
COL1A1P02452 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL1A1P02452 SNORA3C-201ENST00000408792 125 ntBASIC4.68□□□□□ -1.66
COL1A1P02452 TCEA1P2-201ENST00000420496 906 ntBASIC4.68□□□□□ -1.66
COL1A1P02452 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.68□□□□□ -1.66
COL1A1P02452 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.68□□□□□ -1.66
COL1A1P02452 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL1A1P02452 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL1A1P02452 HMGN1P15-201ENST00000513870 295 ntBASIC4.68□□□□□ -1.66
COL1A1P02452 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.68□□□□□ -1.66
COL1A1P02452 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.68□□□□□ -1.66
COL1A1P02452 AP005262.1-201ENST00000582646 997 ntBASIC4.68□□□□□ -1.66
COL1A1P02452 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.68□□□□□ -1.66
COL1A1P02452 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL1A1P02452 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.67□□□□□ -1.66
COL1A1P02452 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.67□□□□□ -1.66
COL1A1P02452 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL1A1P02452 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
COL1A1P02452 ZNF962P-201ENST00000443465 3140 ntBASIC4.67□□□□□ -1.66
COL1A1P02452 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL1A1P02452 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.67□□□□□ -1.66
COL1A1P02452 SNORA3.3-201ENST00000408712 125 ntBASIC4.67□□□□□ -1.66
COL1A1P02452 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.67□□□□□ -1.66
COL1A1P02452 HMGB1P37-201ENST00000439613 609 ntBASIC4.67□□□□□ -1.66
COL1A1P02452 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.67□□□□□ -1.66
COL1A1P02452 PRDX3P3-201ENST00000447765 522 ntBASIC4.67□□□□□ -1.66
COL1A1P02452 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.67□□□□□ -1.66
COL1A1P02452 UBDP1-202ENST00000457888 382 ntBASIC4.67□□□□□ -1.66
COL1A1P02452 WBP1LP4-201ENST00000505043 344 ntBASIC4.67□□□□□ -1.66
COL1A1P02452 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.67□□□□□ -1.66
COL1A1P02452 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.67□□□□□ -1.66
COL1A1P02452 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.67□□□□□ -1.66
COL1A1P02452 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.67□□□□□ -1.66
COL1A1P02452 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.67□□□□□ -1.66
COL1A1P02452 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.67□□□□□ -1.66
COL1A1P02452 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.67□□□□□ -1.66
COL1A1P02452 AC005412.1-201ENST00000580812 1049 ntBASIC4.67□□□□□ -1.66
COL1A1P02452 ZNF415P1-201ENST00000582279 1166 ntBASIC4.67□□□□□ -1.66
COL1A1P02452 MIR5187-201ENST00000583479 76 ntBASIC4.67□□□□□ -1.66
COL1A1P02452 RNU1-30P-201ENST00000606575 163 ntBASIC4.67□□□□□ -1.66
COL1A1P02452 AC092354.2-201ENST00000607786 514 ntBASIC4.67□□□□□ -1.66
COL1A1P02452 AC026368.1-201ENST00000614934 690 ntBASIC4.67□□□□□ -1.66
COL1A1P02452 AC016957.2-201ENST00000616998 848 ntBASIC4.67□□□□□ -1.66
COL1A1P02452 AL022311.1-201ENST00000623726 19416 ntBASIC4.67□□□□□ -1.66
COL1A1P02452 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
COL1A1P02452 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL1A1P02452 AC097504.1-201ENST00000515103 2415 ntBASIC4.66□□□□□ -1.66
COL1A1P02452 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.66□□□□□ -1.66
COL1A1P02452 AC092435.4-201ENST00000623012 4159 ntBASIC4.66□□□□□ -1.66
COL1A1P02452 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.66□□□□□ -1.66
COL1A1P02452 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL1A1P02452 RPL7P60-201ENST00000397636 735 ntBASIC4.66□□□□□ -1.66
COL1A1P02452 MIR1251-201ENST00000408552 70 ntBASIC4.66□□□□□ -1.66
COL1A1P02452 RPL7AP73-201ENST00000413490 353 ntBASIC4.66□□□□□ -1.66
COL1A1P02452 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL1A1P02452 AC011742.1-201ENST00000431448 434 ntBASIC4.66□□□□□ -1.66
COL1A1P02452 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL1A1P02452 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.66□□□□□ -1.66
COL1A1P02452 PLGLA-201ENST00000465668 449 ntBASIC4.66□□□□□ -1.66
COL1A1P02452 AC090589.1-201ENST00000473109 362 ntBASIC4.66□□□□□ -1.66
COL1A1P02452 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.66□□□□□ -1.66
COL1A1P02452 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.66□□□□□ -1.66
COL1A1P02452 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.66□□□□□ -1.66
COL1A1P02452 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.66□□□□□ -1.66
COL1A1P02452 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.66□□□□□ -1.66
COL1A1P02452 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.66□□□□□ -1.66
COL1A1P02452 AC107016.1-201ENST00000550463 337 ntBASIC4.66□□□□□ -1.66
COL1A1P02452 AC016839.1-201ENST00000578162 867 ntBASIC4.66□□□□□ -1.66
COL1A1P02452 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.66□□□□□ -1.66
COL1A1P02452 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.66□□□□□ -1.66
COL1A1P02452 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC4.66□□□□□ -1.66
COL1A1P02452 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.66□□□□□ -1.66
COL1A1P02452 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms