Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 MIR4737-201ENST00000583979 81 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 BMS1P7-201ENST00000602440 1052 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC096553.1-201ENST00000605169 829 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AL356218.2-201ENST00000605264 187 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC025754.2-201ENST00000606491 432 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC015802.5-201ENST00000607478 399 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AP000254.1-201ENST00000609934 520 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 U2.1-201ENST00000618978 145 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC116563.2-201ENST00000624751 535 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 ZNF286A-221ENST00000593105 5222 ntTSL 3 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 PTPRM-203ENST00000400060 5030 ntTSL 5 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 PLCXD2-205ENST00000636933 7710 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 NCAM1-228ENST00000621128 4698 ntTSL 5 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 USP3-201ENST00000268049 5311 ntTSL 5 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 DMD-211ENST00000378707 7410 ntTSL 5 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 NAP1L4P1-201ENST00000319092 1157 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 SNORA62.2-201ENST00000364672 152 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 RNU6-590P-201ENST00000365039 107 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 RNU6-804P-201ENST00000384286 107 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AL024507.1-201ENST00000412741 274 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 PIGPP3-201ENST00000425307 415 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 RPL30P9-201ENST00000465586 330 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC108734.3-201ENST00000481241 1165 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 SSX8-201ENST00000506270 579 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 MRPS33P2-201ENST00000507850 322 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC025465.3-201ENST00000510570 311 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC016065.2-201ENST00000514530 444 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 SNORA70D-201ENST00000578836 135 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 MIR3939-201ENST00000582614 106 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC124016.2-201ENST00000610058 665 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 VN1R74P-201ENST00000613259 503 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC007485.1-201ENST00000616755 206 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC090971.5-201ENST00000621102 293 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC131649.2-201ENST00000624925 4439 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 TP53BP1-210ENST00000450115 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 TRIOBP-204ENST00000406386 10129 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 MYH13-201ENST00000252172 5992 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AL359851.1-201ENST00000569460 4997 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 RNU6-215P-201ENST00000365169 102 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AL049545.1-201ENST00000401856 572 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC011933.1-201ENST00000413334 321 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms