Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 DEFB131E-202ENST00000602581 683 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 RN7SKP299-201ENST00000606679 301 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 AC131235.4-201ENST00000609288 620 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 AC079395.2-201ENST00000610982 737 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 uc_338.9-201ENST00000617424 182 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 AC135068.5-201ENST00000624197 983 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 AC015726.3-201ENST00000624501 418 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 AC084035.1-201ENST00000634543 607 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNX18Q96RF0 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SNX18Q96RF0 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.87□□□□□ -1.63
SNX18Q96RF0 SRRM1P3-201ENST00000426911 2678 ntBASIC4.87□□□□□ -1.63
SNX18Q96RF0 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNX18Q96RF0 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SNX18Q96RF0 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.86□□□□□ -1.63
SNX18Q96RF0 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNX18Q96RF0 HMGB1P5-201ENST00000255320 642 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 RN7SKP160-201ENST00000363804 340 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 RNU6-317P-201ENST00000384031 107 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 RNU6-192P-201ENST00000391253 100 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNX18Q96RF0 AC007738.1-201ENST00000413892 348 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.86□□□□□ -1.63
SNX18Q96RF0 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX18Q96RF0 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX18Q96RF0 MRPS36P1-201ENST00000421291 307 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX18Q96RF0 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX18Q96RF0 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.86□□□□□ -1.63
SNX18Q96RF0 RPL19P16-201ENST00000433839 588 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.86□□□□□ -1.63
SNX18Q96RF0 RPS7P5-201ENST00000441482 581 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 TPTE2P6-202ENST00000445572 1007 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX18Q96RF0 AL672138.1-201ENST00000450604 1015 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 VN1R32P-201ENST00000452234 905 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX18Q96RF0 RPL30P6-201ENST00000475925 342 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 RPL21P6-201ENST00000479171 504 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 IGBP1P4-201ENST00000503202 879 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 AC010625.1-201ENST00000511296 403 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.86□□□□□ -1.63
SNX18Q96RF0 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.86□□□□□ -1.63
SNX18Q96RF0 IGLV2-28-201ENST00000520681 304 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.86□□□□□ -1.63
SNX18Q96RF0 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX18Q96RF0 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNX18Q96RF0 AL391156.1-201ENST00000554965 554 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 AC051619.2-201ENST00000559063 397 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 MRPS21P7-201ENST00000566937 238 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX18Q96RF0 AP001094.1-201ENST00000579805 193 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX18Q96RF0 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX18Q96RF0 AC090312.2-201ENST00000582687 378 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.86□□□□□ -1.63
SNX18Q96RF0 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.86□□□□□ -1.63
SNX18Q96RF0 AC012616.1-201ENST00000600294 197 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 AC244107.2-201ENST00000611773 76 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 AC008115.3-201ENST00000614874 549 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.86□□□□□ -1.63
SNX18Q96RF0 AC116618.1-201ENST00000634617 774 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SNX18Q96RF0 DCAF13P3-201ENST00000561147 1334 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SNX18Q96RF0 NCLP2-201ENST00000416078 1462 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
SNX18Q96RF0 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNX18Q96RF0 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SNX18Q96RF0 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNX18Q96RF0 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNX18Q96RF0 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SNX18Q96RF0 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SNX18Q96RF0 AC046144.1-201ENST00000478559 1853 ntBASIC4.86□□□□□ -1.63
SNX18Q96RF0 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
SNX18Q96RF0 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNX18Q96RF0 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
SNX18Q96RF0 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNX18Q96RF0 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 AL138820.1-201ENST00000617901 5305 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNX18Q96RF0 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNX18Q96RF0 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 MUC2-202ENST00000613187 4845 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNX18Q96RF0 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SNX18Q96RF0 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNX18Q96RF0 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 RNU1-19P-201ENST00000363306 165 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNX18Q96RF0 OR1L6-202ENST00000373684 1044 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms