Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AC010680.3-201ENST00000604215 520 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AC097505.1-201ENST00000610199 565 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 5S_rRNA.16-201ENST00000612928 119 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 MIR8058-201ENST00000615737 89 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 SCARNA15.3-201ENST00000626315 122 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 SCARNA4.1-201ENST00000628597 123 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AL596275.2-204ENST00000641628 552 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AL596275.2-206ENST00000641957 626 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 SAMMSON-213ENST00000641336 1521 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 EEF1A1P42-201ENST00000613436 1331 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 THAP12P8-201ENST00000447914 2115 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 RNA5SP52-201ENST00000362448 134 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 RNA5SP432-201ENST00000362480 116 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AL078604.1-201ENST00000404609 466 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 RPL36AP10-201ENST00000421785 322 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AC092641.1-201ENST00000440229 772 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AGGF1P3-201ENST00000493675 1213 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 CDH12P2-201ENST00000504393 298 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AC020914.6-201ENST00000594327 272 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AL353726.1-201ENST00000614041 1000 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 MIR7112-201ENST00000616126 65 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AC138932.5-201ENST00000617759 563 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 KPNA2P2-201ENST00000419546 1489 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 BCORP1-203ENST00000513194 5093 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AC018529.3-201ENST00000624212 2254 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AL161631.1-201ENST00000417933 486 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 QTRT1P1-201ENST00000604344 1078 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 MFSD8-236ENST00000641509 4050 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AC239868.2-201ENST00000564237 4527 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 RNA5SP175-201ENST00000364275 119 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 RNA5SP267-201ENST00000364893 126 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 PGBD4P8-201ENST00000412993 562 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AL133162.1-201ENST00000463228 453 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AP001486.1-201ENST00000463339 476 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 AC027176.2-201ENST00000559166 746 ntBASIC2.68□□□□□ -1.98
ALMS1Q8TCU4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 VPS35P1-201ENST00000563400 1518 ntBASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 MIR448-201ENST00000362131 111 ntBASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 SNORD66.1-201ENST00000391230 76 ntBASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 AC073063.1-201ENST00000434352 607 ntBASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 AC025750.2-201ENST00000442609 450 ntBASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 RPS27AP15-201ENST00000447672 466 ntBASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 AC098799.1-201ENST00000504752 800 ntBASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 AC024224.1-201ENST00000538284 609 ntBASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 AC005344.1-201ENST00000613391 459 ntBASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 DDX18P6-201ENST00000450119 1997 ntBASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
ALMS1Q8TCU4 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms