Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AL691477.1-201ENST00000624398 162 ntBASIC5.19□□□□□ -1.58
SIMC1Q8NDZ2 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.19□□□□□ -1.58
SIMC1Q8NDZ2 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SIMC1Q8NDZ2 AL034370.1-201ENST00000397254 1590 ntBASIC5.19□□□□□ -1.58
SIMC1Q8NDZ2 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SIMC1Q8NDZ2 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SIMC1Q8NDZ2 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.19□□□□□ -1.58
SIMC1Q8NDZ2 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SIMC1Q8NDZ2 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SIMC1Q8NDZ2 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SIMC1Q8NDZ2 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SIMC1Q8NDZ2 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SIMC1Q8NDZ2 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SIMC1Q8NDZ2 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SIMC1Q8NDZ2 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SIMC1Q8NDZ2 OR4F13P-202ENST00000560066 2054 ntBASIC5.19□□□□□ -1.58
SIMC1Q8NDZ2 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SIMC1Q8NDZ2 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 FAM3C2-201ENST00000312214 681 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 RNU1-19P-201ENST00000363306 165 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 Y_RNA.517-201ENST00000384551 106 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 Y_RNA.553-201ENST00000384670 102 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 MTND4LP20-201ENST00000402379 270 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AL133264.1-201ENST00000407157 562 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 RNU6ATAC25P-201ENST00000408798 117 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 RNA5SP296-201ENST00000410523 111 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 BMS1P17-202ENST00000416720 316 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AC098592.1-201ENST00000419352 333 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AC006960.1-201ENST00000419980 153 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 RPL34P3-201ENST00000421454 338 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AL158073.1-201ENST00000426848 1104 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 OR6D1P-201ENST00000436165 939 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AL390119.1-201ENST00000440329 312 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AZGP1P2-201ENST00000454506 345 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AL109741.2-201ENST00000455561 343 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AC092045.1-201ENST00000495716 1231 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AC104685.1-201ENST00000502445 371 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AC021146.8-201ENST00000507455 733 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 OR5G4P-201ENST00000525251 760 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 PMS2P3-207ENST00000529061 717 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 BLZF2P-201ENST00000553776 1130 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AL133241.1-201ENST00000556832 487 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AC233702.9-201ENST00000581528 203 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 NF1P5-201ENST00000588287 448 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AP001542.2-201ENST00000593141 364 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 VN1R82P-201ENST00000601481 356 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AL136363.2-201ENST00000604173 851 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AC021749.1-201ENST00000604322 607 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 U6atac.1-201ENST00000616025 117 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AC016769.4-201ENST00000616893 535 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 CU639417.4-201ENST00000623928 207 ntBASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SIMC1Q8NDZ2 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms