Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC034205.1-201ENST00000520621 638 ntBASIC4.31□□□□□ -1.72
CDH11P55287 OR8G5-201ENST00000524943 1041 ntBASIC4.31□□□□□ -1.72
CDH11P55287 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.31□□□□□ -1.72
CDH11P55287 AC006518.2-201ENST00000542513 940 ntBASIC4.31□□□□□ -1.72
CDH11P55287 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH11P55287 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH11P55287 NPM1P47-201ENST00000560843 856 ntBASIC4.31□□□□□ -1.72
CDH11P55287 AC095057.3-201ENST00000567102 1157 ntBASIC4.31□□□□□ -1.72
CDH11P55287 AGGF1P5-201ENST00000567900 919 ntBASIC4.31□□□□□ -1.72
CDH11P55287 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.31□□□□□ -1.72
CDH11P55287 MIR3667-201ENST00000581025 74 ntBASIC4.31□□□□□ -1.72
CDH11P55287 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH11P55287 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.31□□□□□ -1.72
CDH11P55287 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH11P55287 AC073387.2-201ENST00000604797 784 ntBASIC4.31□□□□□ -1.72
CDH11P55287 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH11P55287 RNU4-5P-201ENST00000607255 135 ntBASIC4.31□□□□□ -1.72
CDH11P55287 AL157392.4-201ENST00000609756 345 ntBASIC4.31□□□□□ -1.72
CDH11P55287 AL035461.2-201ENST00000619201 524 ntBASIC4.31□□□□□ -1.72
CDH11P55287 AL022401.1-201ENST00000619498 108 ntBASIC4.31□□□□□ -1.72
CDH11P55287 AL359757.1-201ENST00000623176 255 ntBASIC4.31□□□□□ -1.72
CDH11P55287 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDH11P55287 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH11P55287 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.31□□□□□ -1.72
CDH11P55287 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH11P55287 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH11P55287 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.31□□□□□ -1.72
CDH11P55287 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.31□□□□□ -1.72
CDH11P55287 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.31□□□□□ -1.72
CDH11P55287 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH11P55287 AC099654.2-201ENST00000433031 1980 ntBASIC4.31□□□□□ -1.72
CDH11P55287 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH11P55287 SEC63P2-201ENST00000503863 1939 ntBASIC4.31□□□□□ -1.72
CDH11P55287 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH11P55287 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH11P55287 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH11P55287 LINC01109-201ENST00000603837 3081 ntBASIC4.3□□□□□ -1.72
CDH11P55287 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH11P55287 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH11P55287 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH11P55287 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.3□□□□□ -1.72
CDH11P55287 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDH11P55287 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CDH11P55287 SNORA62.2-201ENST00000364672 152 ntBASIC4.3□□□□□ -1.72
CDH11P55287 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CDH11P55287 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH11P55287 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH11P55287 CYB5AP4-201ENST00000396692 399 ntBASIC4.3□□□□□ -1.72
CDH11P55287 ARL4AP5-201ENST00000404372 599 ntBASIC4.3□□□□□ -1.72
CDH11P55287 LIPT1P1-201ENST00000415870 1186 ntBASIC4.3□□□□□ -1.72
CDH11P55287 OSTCP5-201ENST00000425293 453 ntBASIC4.3□□□□□ -1.72
CDH11P55287 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH11P55287 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH11P55287 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH11P55287 AC068135.1-201ENST00000446164 246 ntBASIC4.3□□□□□ -1.72
CDH11P55287 OR52J1P-201ENST00000450596 932 ntBASIC4.3□□□□□ -1.72
CDH11P55287 AL935212.3-201ENST00000450729 284 ntBASIC4.3□□□□□ -1.72
CDH11P55287 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.3□□□□□ -1.72
CDH11P55287 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH11P55287 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH11P55287 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.3□□□□□ -1.72
CDH11P55287 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDH11P55287 AF186190.1-201ENST00000517470 480 ntBASIC4.3□□□□□ -1.72
CDH11P55287 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.3□□□□□ -1.72
CDH11P55287 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.3□□□□□ -1.72
CDH11P55287 CYCSP28-201ENST00000534284 321 ntBASIC4.3□□□□□ -1.72
CDH11P55287 GCSHP4-201ENST00000538792 439 ntBASIC4.3□□□□□ -1.72
CDH11P55287 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH11P55287 DYNLL1P4-201ENST00000549314 266 ntBASIC4.3□□□□□ -1.72
CDH11P55287 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.3□□□□□ -1.72
CDH11P55287 FKBP1BP1-201ENST00000553366 325 ntBASIC4.3□□□□□ -1.72
CDH11P55287 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.3□□□□□ -1.72
CDH11P55287 AL132857.1-201ENST00000555180 708 ntBASIC4.3□□□□□ -1.72
CDH11P55287 ATP5F1P7-201ENST00000567330 760 ntBASIC4.3□□□□□ -1.72
CDH11P55287 MIR4330-201ENST00000579077 105 ntBASIC4.3□□□□□ -1.72
CDH11P55287 AC022884.3-201ENST00000579571 248 ntBASIC4.3□□□□□ -1.72
CDH11P55287 AP005119.2-201ENST00000579735 1105 ntBASIC4.3□□□□□ -1.72
CDH11P55287 MIR4270-201ENST00000581799 70 ntBASIC4.3□□□□□ -1.72
CDH11P55287 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH11P55287 AC125494.3-201ENST00000602759 455 ntBASIC4.3□□□□□ -1.72
CDH11P55287 AC090525.3-201ENST00000605601 189 ntBASIC4.3□□□□□ -1.72
CDH11P55287 AC010424.2-201ENST00000607594 443 ntBASIC4.3□□□□□ -1.72
CDH11P55287 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH11P55287 AC013468.1-201ENST00000608680 598 ntBASIC4.3□□□□□ -1.72
CDH11P55287 AC055764.2-201ENST00000610089 670 ntBASIC4.3□□□□□ -1.72
CDH11P55287 AL161616.1-201ENST00000611867 286 ntBASIC4.3□□□□□ -1.72
CDH11P55287 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH11P55287 AC024595.1-201ENST00000623088 387 ntBASIC4.3□□□□□ -1.72
CDH11P55287 AC138907.10-201ENST00000623708 983 ntBASIC4.3□□□□□ -1.72
CDH11P55287 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDH11P55287 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH11P55287 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
CDH11P55287 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH11P55287 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH11P55287 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH11P55287 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDH11P55287 EOGT-210ENST00000615922 1931 ntBASIC4.29□□□□□ -1.72
CDH11P55287 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH11P55287 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.29□□□□□ -1.72
CDH11P55287 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms