Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RPL23AP24-201ENST00000458203 385 ntBASIC4.73□□□□□ -1.65
LIMK1P53667 AC073073.1-201ENST00000493920 463 ntBASIC4.73□□□□□ -1.65
LIMK1P53667 AC133963.2-201ENST00000513686 578 ntBASIC4.73□□□□□ -1.65
LIMK1P53667 RNA5SP392-201ENST00000516905 112 ntBASIC4.73□□□□□ -1.65
LIMK1P53667 AC105031.1-201ENST00000518550 476 ntBASIC4.73□□□□□ -1.65
LIMK1P53667 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.73□□□□□ -1.65
LIMK1P53667 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.73□□□□□ -1.65
LIMK1P53667 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.73□□□□□ -1.65
LIMK1P53667 POLR2KP1-201ENST00000553226 168 ntBASIC4.73□□□□□ -1.65
LIMK1P53667 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.73□□□□□ -1.65
LIMK1P53667 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.73□□□□□ -1.65
LIMK1P53667 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.73□□□□□ -1.65
LIMK1P53667 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.73□□□□□ -1.65
LIMK1P53667 AC022726.1-201ENST00000587475 207 ntBASIC4.73□□□□□ -1.65
LIMK1P53667 ZNF92P3-201ENST00000596594 954 ntBASIC4.73□□□□□ -1.65
LIMK1P53667 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.73□□□□□ -1.65
LIMK1P53667 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.73□□□□□ -1.65
LIMK1P53667 AC026741.1-201ENST00000605892 482 ntBASIC4.73□□□□□ -1.65
LIMK1P53667 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LIMK1P53667 MIR8084-201ENST00000614105 89 ntBASIC4.73□□□□□ -1.65
LIMK1P53667 RMST_10.1-201ENST00000616309 154 ntBASIC4.73□□□□□ -1.65
LIMK1P53667 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.73□□□□□ -1.65
LIMK1P53667 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.73□□□□□ -1.65
LIMK1P53667 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
LIMK1P53667 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LIMK1P53667 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
LIMK1P53667 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LIMK1P53667 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LIMK1P53667 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.73□□□□□ -1.65
LIMK1P53667 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LIMK1P53667 AC125257.1-201ENST00000560400 2930 ntBASIC4.73□□□□□ -1.65
LIMK1P53667 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LIMK1P53667 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
LIMK1P53667 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.72□□□□□ -1.65
LIMK1P53667 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.72□□□□□ -1.65
LIMK1P53667 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LIMK1P53667 SMG1P4-204ENST00000523028 4131 ntBASIC4.72□□□□□ -1.65
LIMK1P53667 AL133412.1-201ENST00000380194 2992 ntBASIC4.72□□□□□ -1.65
LIMK1P53667 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LIMK1P53667 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LIMK1P53667 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.72□□□□□ -1.65
LIMK1P53667 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
LIMK1P53667 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LIMK1P53667 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LIMK1P53667 SNORA63.3-201ENST00000362682 132 ntBASIC4.72□□□□□ -1.65
LIMK1P53667 RPS26P8-201ENST00000393490 348 ntBASIC4.72□□□□□ -1.65
LIMK1P53667 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.72□□□□□ -1.65
LIMK1P53667 AL606495.1-201ENST00000422100 813 ntBASIC4.72□□□□□ -1.65
LIMK1P53667 AC005189.1-201ENST00000431286 310 ntBASIC4.72□□□□□ -1.65
LIMK1P53667 AC090018.1-201ENST00000434369 367 ntBASIC4.72□□□□□ -1.65
LIMK1P53667 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.72□□□□□ -1.65
LIMK1P53667 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.72□□□□□ -1.65
LIMK1P53667 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.72□□□□□ -1.65
LIMK1P53667 RN7SL303P-201ENST00000469773 251 ntBASIC4.72□□□□□ -1.65
LIMK1P53667 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.72□□□□□ -1.65
LIMK1P53667 ARL4AP1-201ENST00000503220 705 ntBASIC4.72□□□□□ -1.65
LIMK1P53667 AC010285.3-201ENST00000511668 676 ntBASIC4.72□□□□□ -1.65
LIMK1P53667 AC112206.4-201ENST00000515142 405 ntBASIC4.72□□□□□ -1.65
LIMK1P53667 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.72□□□□□ -1.65
LIMK1P53667 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.72□□□□□ -1.65
LIMK1P53667 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.72□□□□□ -1.65
LIMK1P53667 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.72□□□□□ -1.65
LIMK1P53667 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LIMK1P53667 CYCSP29-201ENST00000533731 318 ntBASIC4.72□□□□□ -1.65
LIMK1P53667 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
LIMK1P53667 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.72□□□□□ -1.65
LIMK1P53667 AC115286.1-201ENST00000604298 434 ntBASIC4.72□□□□□ -1.65
LIMK1P53667 AC026979.4-201ENST00000606555 645 ntBASIC4.72□□□□□ -1.65
LIMK1P53667 AL049536.1-201ENST00000625043 744 ntBASIC4.72□□□□□ -1.65
LIMK1P53667 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
LIMK1P53667 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.72□□□□□ -1.65
LIMK1P53667 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LIMK1P53667 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LIMK1P53667 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.72□□□□□ -1.65
LIMK1P53667 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LIMK1P53667 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.72□□□□□ -1.65
LIMK1P53667 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.72□□□□□ -1.65
LIMK1P53667 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.65
LIMK1P53667 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
LIMK1P53667 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.71□□□□□ -1.65
LIMK1P53667 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.71□□□□□ -1.66
LIMK1P53667 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LIMK1P53667 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
LIMK1P53667 AC112198.2-201ENST00000426589 6996 ntBASIC4.71□□□□□ -1.66
LIMK1P53667 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
LIMK1P53667 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.71□□□□□ -1.66
LIMK1P53667 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LIMK1P53667 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LIMK1P53667 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.71□□□□□ -1.66
LIMK1P53667 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.71□□□□□ -1.66
LIMK1P53667 AP000357.1-201ENST00000409926 1165 ntBASIC4.71□□□□□ -1.66
LIMK1P53667 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.71□□□□□ -1.66
LIMK1P53667 CEACAMP8-201ENST00000413902 580 ntBASIC4.71□□□□□ -1.66
LIMK1P53667 AL158050.1-201ENST00000416077 457 ntBASIC4.71□□□□□ -1.66
LIMK1P53667 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.71□□□□□ -1.66
LIMK1P53667 AC008173.1-201ENST00000418901 264 ntBASIC4.71□□□□□ -1.66
LIMK1P53667 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.71□□□□□ -1.66
LIMK1P53667 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LIMK1P53667 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.71□□□□□ -1.66
LIMK1P53667 MTCO1P43-201ENST00000431831 488 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms