Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
COPB1P53618 AC021242.1-201ENST00000507315 2035 ntBASIC5.19□□□□□ -1.58
COPB1P53618 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.19□□□□□ -1.58
COPB1P53618 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
COPB1P53618 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
COPB1P53618 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.19□□□□□ -1.58
COPB1P53618 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
COPB1P53618 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COPB1P53618 OR56B2P-201ENST00000317102 954 ntBASIC5.19□□□□□ -1.58
COPB1P53618 SNORD113-6-201ENST00000363345 75 ntBASIC5.19□□□□□ -1.58
COPB1P53618 RNU1-87P-201ENST00000363727 170 ntBASIC5.19□□□□□ -1.58
COPB1P53618 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COPB1P53618 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
COPB1P53618 MIR142-201ENST00000384835 87 ntBASIC5.19□□□□□ -1.58
COPB1P53618 MIR195-201ENST00000385194 87 ntBASIC5.19□□□□□ -1.58
COPB1P53618 DNAJC19P6-201ENST00000401853 280 ntBASIC5.19□□□□□ -1.58
COPB1P53618 AL589647.1-201ENST00000402485 466 ntBASIC5.19□□□□□ -1.58
COPB1P53618 FCF1P5-201ENST00000406490 482 ntBASIC5.19□□□□□ -1.58
COPB1P53618 RN7SKP216-201ENST00000411050 312 ntBASIC5.19□□□□□ -1.58
COPB1P53618 RN7SKP273-201ENST00000411392 314 ntBASIC5.19□□□□□ -1.58
COPB1P53618 AL008987.1-201ENST00000415528 237 ntBASIC5.19□□□□□ -1.58
COPB1P53618 AC246680.2-201ENST00000422106 389 ntBASIC5.19□□□□□ -1.58
COPB1P53618 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.19□□□□□ -1.58
COPB1P53618 Z74021.1-201ENST00000423610 407 ntBASIC5.19□□□□□ -1.58
COPB1P53618 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.19□□□□□ -1.58
COPB1P53618 UBE2V1P1-201ENST00000430836 445 ntBASIC5.19□□□□□ -1.58
COPB1P53618 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.19□□□□□ -1.58
COPB1P53618 VN1R54P-201ENST00000435210 1049 ntBASIC5.19□□□□□ -1.58
COPB1P53618 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.19□□□□□ -1.58
COPB1P53618 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.19□□□□□ -1.58
COPB1P53618 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.19□□□□□ -1.58
COPB1P53618 MTCYBP42-201ENST00000444653 1130 ntBASIC5.19□□□□□ -1.58
COPB1P53618 CASP3P1-201ENST00000446037 609 ntBASIC5.19□□□□□ -1.58
COPB1P53618 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.19□□□□□ -1.58
COPB1P53618 USP9YP25-201ENST00000457708 443 ntBASIC5.19□□□□□ -1.58
COPB1P53618 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.19□□□□□ -1.58
COPB1P53618 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.19□□□□□ -1.58
COPB1P53618 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
COPB1P53618 AC140172.1-201ENST00000502928 141 ntBASIC5.19□□□□□ -1.58
COPB1P53618 AC091951.3-201ENST00000504093 246 ntBASIC5.19□□□□□ -1.58
COPB1P53618 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.19□□□□□ -1.58
COPB1P53618 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.19□□□□□ -1.58
COPB1P53618 AL671862.1-201ENST00000515851 349 ntBASIC5.19□□□□□ -1.58
COPB1P53618 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.19□□□□□ -1.58
COPB1P53618 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.19□□□□□ -1.58
COPB1P53618 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.19□□□□□ -1.58
COPB1P53618 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.19□□□□□ -1.58
COPB1P53618 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.19□□□□□ -1.58
COPB1P53618 AC109446.2-201ENST00000567872 497 ntBASIC5.19□□□□□ -1.58
COPB1P53618 PIGPP4-201ENST00000584447 307 ntBASIC5.19□□□□□ -1.58
COPB1P53618 AC022726.1-201ENST00000587475 207 ntBASIC5.19□□□□□ -1.58
COPB1P53618 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.19□□□□□ -1.58
COPB1P53618 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.19□□□□□ -1.58
COPB1P53618 AC015726.1-201ENST00000602353 681 ntBASIC5.19□□□□□ -1.58
COPB1P53618 AC245008.1-201ENST00000608123 476 ntBASIC5.19□□□□□ -1.58
COPB1P53618 AP001521.2-201ENST00000608772 546 ntBASIC5.19□□□□□ -1.58
COPB1P53618 AC140113.4-201ENST00000622087 222 ntBASIC5.19□□□□□ -1.58
COPB1P53618 AC139792.2-201ENST00000624218 587 ntBASIC5.19□□□□□ -1.58
COPB1P53618 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
COPB1P53618 MIR3974-201ENST00000637126 96 ntBASIC5.19□□□□□ -1.58
COPB1P53618 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.19□□□□□ -1.58
COPB1P53618 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COPB1P53618 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
COPB1P53618 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.19□□□□□ -1.58
COPB1P53618 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COPB1P53618 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COPB1P53618 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COPB1P53618 AC120338.1-201ENST00000625074 1541 ntBASIC5.18□□□□□ -1.58
COPB1P53618 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COPB1P53618 AC139713.2-215ENST00000641428 5037 ntBASIC5.18□□□□□ -1.58
COPB1P53618 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
COPB1P53618 RNU4-7P-201ENST00000364758 141 ntBASIC5.18□□□□□ -1.58
COPB1P53618 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COPB1P53618 RNU6-244P-201ENST00000391028 104 ntBASIC5.18□□□□□ -1.58
COPB1P53618 SKINT1L-201ENST00000401057 817 ntBASIC5.18□□□□□ -1.58
COPB1P53618 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.18□□□□□ -1.58
COPB1P53618 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.18□□□□□ -1.58
COPB1P53618 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.18□□□□□ -1.58
COPB1P53618 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.18□□□□□ -1.58
COPB1P53618 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.18□□□□□ -1.58
COPB1P53618 MTND4P32-201ENST00000437189 1237 ntBASIC5.18□□□□□ -1.58
COPB1P53618 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.18□□□□□ -1.58
COPB1P53618 PRPF38AP2-201ENST00000438179 851 ntBASIC5.18□□□□□ -1.58
COPB1P53618 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.18□□□□□ -1.58
COPB1P53618 YWHAZP2-201ENST00000440317 728 ntBASIC5.18□□□□□ -1.58
COPB1P53618 AC234781.3-201ENST00000452540 973 ntBASIC5.18□□□□□ -1.58
COPB1P53618 ART2BP-201ENST00000453501 499 ntBASIC5.18□□□□□ -1.58
COPB1P53618 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.18□□□□□ -1.58
COPB1P53618 AC109462.1-201ENST00000491087 368 ntBASIC5.18□□□□□ -1.58
COPB1P53618 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.18□□□□□ -1.58
COPB1P53618 RN7SL808P-201ENST00000496066 299 ntBASIC5.18□□□□□ -1.58
COPB1P53618 RN7SKP66-201ENST00000516681 231 ntBASIC5.18□□□□□ -1.58
COPB1P53618 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.18□□□□□ -1.58
COPB1P53618 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC5.18□□□□□ -1.58
COPB1P53618 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.18□□□□□ -1.58
COPB1P53618 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.18□□□□□ -1.58
COPB1P53618 OR5D15P-201ENST00000531671 942 ntBASIC5.18□□□□□ -1.58
COPB1P53618 AL356057.1-201ENST00000533798 831 ntBASIC5.18□□□□□ -1.58
COPB1P53618 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COPB1P53618 AC133555.2-201ENST00000550213 292 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms