Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.06□□□□□ -1.76
SHC1P29353 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.06□□□□□ -1.76
SHC1P29353 AC069306.1-201ENST00000507006 843 ntBASIC4.06□□□□□ -1.76
SHC1P29353 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.06□□□□□ -1.76
SHC1P29353 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.06□□□□□ -1.76
SHC1P29353 AC093770.1-201ENST00000511559 571 ntBASIC4.06□□□□□ -1.76
SHC1P29353 AC016550.3-201ENST00000515706 767 ntBASIC4.06□□□□□ -1.76
SHC1P29353 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.06□□□□□ -1.76
SHC1P29353 AC034205.1-201ENST00000520621 638 ntBASIC4.06□□□□□ -1.76
SHC1P29353 AC139103.1-201ENST00000534696 1030 ntBASIC4.06□□□□□ -1.76
SHC1P29353 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.06□□□□□ -1.76
SHC1P29353 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SHC1P29353 AGGF1P5-201ENST00000567900 919 ntBASIC4.06□□□□□ -1.76
SHC1P29353 MIR4715-201ENST00000584117 79 ntBASIC4.06□□□□□ -1.76
SHC1P29353 AL137072.1-201ENST00000603444 466 ntBASIC4.06□□□□□ -1.76
SHC1P29353 AC103792.1-201ENST00000603591 919 ntBASIC4.06□□□□□ -1.76
SHC1P29353 AC069431.2-201ENST00000604149 1099 ntBASIC4.06□□□□□ -1.76
SHC1P29353 AL445435.1-201ENST00000604232 665 ntBASIC4.06□□□□□ -1.76
SHC1P29353 AC115286.1-201ENST00000604298 434 ntBASIC4.06□□□□□ -1.76
SHC1P29353 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.06□□□□□ -1.76
SHC1P29353 AC026741.1-201ENST00000605892 482 ntBASIC4.06□□□□□ -1.76
SHC1P29353 AC112503.1-201ENST00000608436 391 ntBASIC4.06□□□□□ -1.76
SHC1P29353 AL096803.3-201ENST00000609032 532 ntBASIC4.06□□□□□ -1.76
SHC1P29353 AC019131.2-201ENST00000609071 870 ntBASIC4.06□□□□□ -1.76
SHC1P29353 AP005229.2-201ENST00000609980 697 ntBASIC4.06□□□□□ -1.76
SHC1P29353 DUXAP10-204ENST00000612052 616 ntBASIC4.06□□□□□ -1.76
SHC1P29353 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.06□□□□□ -1.76
SHC1P29353 RMST_5.1-201ENST00000618704 126 ntBASIC4.06□□□□□ -1.76
SHC1P29353 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.06□□□□□ -1.76
SHC1P29353 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.06□□□□□ -1.76
SHC1P29353 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SHC1P29353 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SHC1P29353 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.06□□□□□ -1.76
SHC1P29353 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.06□□□□□ -1.76
SHC1P29353 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.06□□□□□ -1.76
SHC1P29353 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SHC1P29353 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SHC1P29353 LINC00622-201ENST00000562811 1570 ntBASIC4.06□□□□□ -1.76
SHC1P29353 AC139769.1-204ENST00000472297 1931 ntBASIC4.05□□□□□ -1.76
SHC1P29353 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
SHC1P29353 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
SHC1P29353 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.05□□□□□ -1.76
SHC1P29353 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHC1P29353 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.05□□□□□ -1.76
SHC1P29353 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHC1P29353 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHC1P29353 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHC1P29353 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.05□□□□□ -1.76
SHC1P29353 RPS3AP23-201ENST00000401762 784 ntBASIC4.05□□□□□ -1.76
SHC1P29353 TCEA1P2-201ENST00000420496 906 ntBASIC4.05□□□□□ -1.76
SHC1P29353 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.05□□□□□ -1.76
SHC1P29353 RPL23AP4-201ENST00000427757 463 ntBASIC4.05□□□□□ -1.76
SHC1P29353 SKP1P3-201ENST00000429280 487 ntBASIC4.05□□□□□ -1.76
SHC1P29353 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.05□□□□□ -1.76
SHC1P29353 AC022022.1-201ENST00000430304 178 ntBASIC4.05□□□□□ -1.76
SHC1P29353 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SHC1P29353 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SHC1P29353 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.05□□□□□ -1.76
SHC1P29353 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.05□□□□□ -1.76
SHC1P29353 CCRL1P1-201ENST00000449542 1053 ntBASIC4.05□□□□□ -1.76
SHC1P29353 AL009048.1-201ENST00000450437 298 ntBASIC4.05□□□□□ -1.76
SHC1P29353 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.05□□□□□ -1.76
SHC1P29353 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.05□□□□□ -1.76
SHC1P29353 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.05□□□□□ -1.76
SHC1P29353 LARP7P4-201ENST00000481075 878 ntBASIC4.05□□□□□ -1.76
SHC1P29353 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.05□□□□□ -1.76
SHC1P29353 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.05□□□□□ -1.76
SHC1P29353 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.05□□□□□ -1.76
SHC1P29353 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.05□□□□□ -1.76
SHC1P29353 OR8G5-201ENST00000524943 1041 ntBASIC4.05□□□□□ -1.76
SHC1P29353 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.05□□□□□ -1.76
SHC1P29353 AC004923.2-201ENST00000529649 369 ntBASIC4.05□□□□□ -1.76
SHC1P29353 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SHC1P29353 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
SHC1P29353 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.05□□□□□ -1.76
SHC1P29353 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.05□□□□□ -1.76
SHC1P29353 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.05□□□□□ -1.76
SHC1P29353 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.05□□□□□ -1.76
SHC1P29353 AC068831.4-201ENST00000556118 109 ntBASIC4.05□□□□□ -1.76
SHC1P29353 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.05□□□□□ -1.76
SHC1P29353 AC023825.1-201ENST00000566704 1030 ntBASIC4.05□□□□□ -1.76
SHC1P29353 AP005119.2-201ENST00000579735 1105 ntBASIC4.05□□□□□ -1.76
SHC1P29353 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SHC1P29353 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.05□□□□□ -1.76
SHC1P29353 AC015813.4-201ENST00000610469 179 ntBASIC4.05□□□□□ -1.76
SHC1P29353 LINC01808-202ENST00000641680 1116 ntBASIC4.05□□□□□ -1.76
SHC1P29353 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
SHC1P29353 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
SHC1P29353 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SHC1P29353 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.05□□□□□ -1.76
SHC1P29353 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHC1P29353 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHC1P29353 OR56B2P-202ENST00000641377 2453 ntBASIC4.04□□□□□ -1.76
SHC1P29353 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.04□□□□□ -1.76
SHC1P29353 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.04□□□□□ -1.76
SHC1P29353 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SHC1P29353 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SHC1P29353 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SHC1P29353 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.04□□□□□ -1.76
SHC1P29353 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms