Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
VCANP13611 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VCANP13611 BTF3P9-201ENST00000418784 283 ntBASIC3.87□□□□□ -1.79
VCANP13611 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.87□□□□□ -1.79
VCANP13611 RNA5SP341-201ENST00000516261 117 ntBASIC3.87□□□□□ -1.79
VCANP13611 SUMO2P19-201ENST00000518920 295 ntBASIC3.87□□□□□ -1.79
VCANP13611 AC022695.1-201ENST00000522089 237 ntBASIC3.87□□□□□ -1.79
VCANP13611 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.87□□□□□ -1.79
VCANP13611 AP000916.1-201ENST00000533869 835 ntBASIC3.87□□□□□ -1.79
VCANP13611 AC069240.1-201ENST00000548774 375 ntBASIC3.87□□□□□ -1.79
VCANP13611 AC006539.2-201ENST00000601729 572 ntBASIC3.87□□□□□ -1.79
VCANP13611 AC005520.3-201ENST00000602874 370 ntBASIC3.87□□□□□ -1.79
VCANP13611 AP003392.5-201ENST00000607857 415 ntBASIC3.87□□□□□ -1.79
VCANP13611 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
VCANP13611 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VCANP13611 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VCANP13611 AC021755.1-201ENST00000559747 1447 ntBASIC3.87□□□□□ -1.79
VCANP13611 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
VCANP13611 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VCANP13611 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.87□□□□□ -1.79
VCANP13611 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VCANP13611 RNA5SP97-201ENST00000365006 84 ntBASIC3.87□□□□□ -1.79
VCANP13611 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VCANP13611 RPL29P14-201ENST00000495837 428 ntBASIC3.87□□□□□ -1.79
VCANP13611 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.87□□□□□ -1.79
VCANP13611 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
VCANP13611 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VCANP13611 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VCANP13611 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VCANP13611 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VCANP13611 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC3.86□□□□□ -1.79
VCANP13611 RNA5SP50-201ENST00000363731 107 ntBASIC3.86□□□□□ -1.79
VCANP13611 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VCANP13611 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.86□□□□□ -1.79
VCANP13611 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
VCANP13611 RPL23AP92-201ENST00000603609 255 ntBASIC3.86□□□□□ -1.79
VCANP13611 IMMP1LP1-201ENST00000605170 488 ntBASIC3.86□□□□□ -1.79
VCANP13611 AC084036.1-201ENST00000609190 508 ntBASIC3.86□□□□□ -1.79
VCANP13611 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
VCANP13611 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
VCANP13611 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VCANP13611 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VCANP13611 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.86□□□□□ -1.79
VCANP13611 RPL21P110-201ENST00000433345 446 ntBASIC3.86□□□□□ -1.79
VCANP13611 RPL21P112-201ENST00000434403 463 ntBASIC3.86□□□□□ -1.79
VCANP13611 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC3.86□□□□□ -1.79
VCANP13611 RN7SKP31-201ENST00000516354 278 ntBASIC3.86□□□□□ -1.79
VCANP13611 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.86□□□□□ -1.79
VCANP13611 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.86□□□□□ -1.79
VCANP13611 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VCANP13611 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC3.86□□□□□ -1.79
VCANP13611 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.86□□□□□ -1.79
VCANP13611 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC3.86□□□□□ -1.79
VCANP13611 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.86□□□□□ -1.79
VCANP13611 CCDC75P1-201ENST00000469247 791 ntBASIC3.86□□□□□ -1.79
VCANP13611 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.86□□□□□ -1.79
VCANP13611 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.86□□□□□ -1.79
VCANP13611 FRG1EP-201ENST00000634469 770 ntBASIC3.86□□□□□ -1.79
VCANP13611 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.86□□□□□ -1.79
VCANP13611 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC3.86□□□□□ -1.79
VCANP13611 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VCANP13611 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC3.86□□□□□ -1.79
VCANP13611 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VCANP13611 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
VCANP13611 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
VCANP13611 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.86□□□□□ -1.79
VCANP13611 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
VCANP13611 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VCANP13611 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VCANP13611 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VCANP13611 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VCANP13611 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VCANP13611 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
VCANP13611 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.85□□□□□ -1.79
VCANP13611 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.85□□□□□ -1.79
VCANP13611 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.85□□□□□ -1.79
VCANP13611 AC073522.1-201ENST00000483312 377 ntBASIC3.85□□□□□ -1.79
VCANP13611 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC3.85□□□□□ -1.79
VCANP13611 AC026784.1-201ENST00000507986 352 ntBASIC3.85□□□□□ -1.79
VCANP13611 RNU7-143P-201ENST00000516781 65 ntBASIC3.85□□□□□ -1.79
VCANP13611 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.85□□□□□ -1.79
VCANP13611 AL121594.4-201ENST00000556211 1196 ntBASIC3.85□□□□□ -1.79
VCANP13611 AC090312.2-201ENST00000582687 378 ntBASIC3.85□□□□□ -1.79
VCANP13611 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.85□□□□□ -1.79
VCANP13611 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
VCANP13611 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
VCANP13611 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VCANP13611 SMG1P4-204ENST00000523028 4131 ntBASIC3.85□□□□□ -1.79
VCANP13611 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VCANP13611 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
VCANP13611 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
VCANP13611 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VCANP13611 AC138393.1-206ENST00000540997 1886 ntBASIC3.85□□□□□ -1.79
VCANP13611 RIOK3P1-201ENST00000418778 1528 ntBASIC3.85□□□□□ -1.79
VCANP13611 AL136097.1-201ENST00000456945 913 ntBASIC3.85□□□□□ -1.79
VCANP13611 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.85□□□□□ -1.79
VCANP13611 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.85□□□□□ -1.79
VCANP13611 AC025627.2-201ENST00000576220 160 ntBASIC3.85□□□□□ -1.79
VCANP13611 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VCANP13611 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms