Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VPS4BO75351 AC005294.1-201ENST00000355509 281 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS4BO75351 Y_RNA.51-201ENST00000362725 102 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 RNU6-931P-201ENST00000363850 107 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
VPS4BO75351 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VPS4BO75351 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VPS4BO75351 AL138880.1-201ENST00000405824 642 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 OR51A3P-201ENST00000413596 924 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 AC019050.1-201ENST00000418508 492 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS4BO75351 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS4BO75351 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS4BO75351 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS4BO75351 ELOCP8-201ENST00000439309 332 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 AC092809.1-201ENST00000441469 474 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 ELOCP15-201ENST00000442090 332 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 AL035551.1-201ENST00000446931 348 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS4BO75351 FAR2P1-206ENST00000449736 709 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 MTCO3P16-201ENST00000454456 754 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS4BO75351 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS4BO75351 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS4BO75351 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS4BO75351 SYPL1P1-201ENST00000473622 768 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 RPL30P6-201ENST00000475925 342 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 RPS18P6-201ENST00000476880 458 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 RPL7P18-201ENST00000478965 734 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS4BO75351 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS4BO75351 VPS26AP1-201ENST00000483197 979 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 AC090638.1-201ENST00000498296 909 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS4BO75351 AC098799.3-201ENST00000506095 438 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS4BO75351 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS4BO75351 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS4BO75351 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
VPS4BO75351 UBE2NP1-201ENST00000545592 458 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS4BO75351 AL358913.1-201ENST00000554342 121 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS4BO75351 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS4BO75351 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS4BO75351 MRPS21P7-201ENST00000566937 238 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 BPTFP1-201ENST00000579209 492 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 AC103987.3-201ENST00000582071 292 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 AC006272.2-201ENST00000594725 163 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS4BO75351 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS4BO75351 AL590229.1-201ENST00000603497 542 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 AC055764.2-201ENST00000610089 670 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 AC004223.4-201ENST00000612426 332 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 AC010608.2-201ENST00000624830 470 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS4BO75351 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS4BO75351 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VPS4BO75351 AC046144.1-201ENST00000478559 1853 ntBASIC5.2□□□□□ -1.58
VPS4BO75351 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
VPS4BO75351 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS4BO75351 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 RNF6P1-201ENST00000444889 1784 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 AC023421.1-201ENST00000590535 1785 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS4BO75351 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
VPS4BO75351 HMGB1P5-201ENST00000255320 642 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 RPL23P2-201ENST00000320371 421 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 IL6STP1-201ENST00000346911 1020 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VPS4BO75351 RNU6-621P-201ENST00000364752 109 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS4BO75351 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VPS4BO75351 MIR217-201ENST00000384817 110 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 RPS3AP26-201ENST00000398259 784 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 AL021407.1-201ENST00000404531 386 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS4BO75351 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS4BO75351 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VPS4BO75351 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.19□□□□□ -1.58
VPS4BO75351 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS4BO75351 AL035407.1-201ENST00000429211 571 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 AC022022.1-201ENST00000430304 178 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.19□□□□□ -1.58
VPS4BO75351 RPL21P110-201ENST00000433345 446 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS4BO75351 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS4BO75351 GTF3AP5-201ENST00000442645 697 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS4BO75351 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.19□□□□□ -1.58
VPS4BO75351 AC245028.2-201ENST00000458673 253 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 AC079168.1-201ENST00000458741 345 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS4BO75351 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS4BO75351 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 AC112198.1-201ENST00000505369 1220 ntBASIC5.19□□□□□ -1.58
VPS4BO75351 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS4BO75351 SCARNA16.4-201ENST00000516956 187 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms