Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
DNMT3AQ9Y6K1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
DNMT3AQ9Y6K1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DNMT3AQ9Y6K1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DNMT3AQ9Y6K1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DNMT3AQ9Y6K1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
DNMT3AQ9Y6K1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
DNMT3AQ9Y6K1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
DNMT3AQ9Y6K1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.01■□□□□ 0.63
DNMT3AQ9Y6K1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DNMT3AQ9Y6K1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DNMT3AQ9Y6K1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
DNMT3AQ9Y6K1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.01■□□□□ 0.63
DNMT3AQ9Y6K1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DNMT3AQ9Y6K1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.01■□□□□ 0.63
DNMT3AQ9Y6K1 AP003071.4-201ENST00000562276 1284 ntBASIC19.01■□□□□ 0.63
DNMT3AQ9Y6K1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.01■□□□□ 0.63
DNMT3AQ9Y6K1 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.01■□□□□ 0.63
DNMT3AQ9Y6K1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.01■□□□□ 0.63
DNMT3AQ9Y6K1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DNMT3AQ9Y6K1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.01■□□□□ 0.63
DNMT3AQ9Y6K1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
DNMT3AQ9Y6K1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.01■□□□□ 0.63
DNMT3AQ9Y6K1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
DNMT3AQ9Y6K1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DNMT3AQ9Y6K1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19■□□□□ 0.63
DNMT3AQ9Y6K1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
DNMT3AQ9Y6K1 ZNF815P-204ENST00000434898 1737 ntBASIC19■□□□□ 0.63
DNMT3AQ9Y6K1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
DNMT3AQ9Y6K1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DNMT3AQ9Y6K1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DNMT3AQ9Y6K1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19■□□□□ 0.63
DNMT3AQ9Y6K1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DNMT3AQ9Y6K1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19■□□□□ 0.63
DNMT3AQ9Y6K1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19■□□□□ 0.63
DNMT3AQ9Y6K1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19■□□□□ 0.63
DNMT3AQ9Y6K1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19■□□□□ 0.63
DNMT3AQ9Y6K1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DNMT3AQ9Y6K1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19■□□□□ 0.63
DNMT3AQ9Y6K1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
DNMT3AQ9Y6K1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DNMT3AQ9Y6K1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19■□□□□ 0.63
DNMT3AQ9Y6K1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DNMT3AQ9Y6K1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DNMT3AQ9Y6K1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
DNMT3AQ9Y6K1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
DNMT3AQ9Y6K1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DNMT3AQ9Y6K1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19■□□□□ 0.63
DNMT3AQ9Y6K1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DNMT3AQ9Y6K1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DNMT3AQ9Y6K1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3AQ9Y6K1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3AQ9Y6K1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3AQ9Y6K1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
DNMT3AQ9Y6K1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3AQ9Y6K1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3AQ9Y6K1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.99■□□□□ 0.63
DNMT3AQ9Y6K1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.99■□□□□ 0.63
DNMT3AQ9Y6K1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3AQ9Y6K1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3AQ9Y6K1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.99■□□□□ 0.63
DNMT3AQ9Y6K1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.99■□□□□ 0.63
DNMT3AQ9Y6K1 AC130371.2-201ENST00000619443 611 ntBASIC18.99■□□□□ 0.63
DNMT3AQ9Y6K1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.99■□□□□ 0.63
DNMT3AQ9Y6K1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3AQ9Y6K1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3AQ9Y6K1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3AQ9Y6K1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3AQ9Y6K1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3AQ9Y6K1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3AQ9Y6K1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3AQ9Y6K1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
DNMT3AQ9Y6K1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.99■□□□□ 0.63
DNMT3AQ9Y6K1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3AQ9Y6K1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DNMT3AQ9Y6K1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DNMT3AQ9Y6K1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
DNMT3AQ9Y6K1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DNMT3AQ9Y6K1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.98■□□□□ 0.63
DNMT3AQ9Y6K1 AC125437.2-201ENST00000625180 2167 ntBASIC18.98■□□□□ 0.63
DNMT3AQ9Y6K1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DNMT3AQ9Y6K1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DNMT3AQ9Y6K1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DNMT3AQ9Y6K1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.98■□□□□ 0.63
DNMT3AQ9Y6K1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.98■□□□□ 0.63
DNMT3AQ9Y6K1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
DNMT3AQ9Y6K1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.98■□□□□ 0.63
DNMT3AQ9Y6K1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.98■□□□□ 0.63
DNMT3AQ9Y6K1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.98■□□□□ 0.63
DNMT3AQ9Y6K1 MIR6786-201ENST00000616843 113 ntBASIC18.98■□□□□ 0.63
DNMT3AQ9Y6K1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
DNMT3AQ9Y6K1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.98■□□□□ 0.63
DNMT3AQ9Y6K1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
DNMT3AQ9Y6K1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DNMT3AQ9Y6K1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DNMT3AQ9Y6K1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.98■□□□□ 0.63
DNMT3AQ9Y6K1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DNMT3AQ9Y6K1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.98■□□□□ 0.63
DNMT3AQ9Y6K1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DNMT3AQ9Y6K1 AC104417.2-201ENST00000562989 1793 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms