Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.3■□□□□ 0.52
GPC6Q9Y625 AC097658.1-201ENST00000475555 843 ntBASIC18.3■□□□□ 0.52
GPC6Q9Y625 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.3■□□□□ 0.52
GPC6Q9Y625 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GPC6Q9Y625 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GPC6Q9Y625 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
GPC6Q9Y625 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GPC6Q9Y625 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GPC6Q9Y625 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GPC6Q9Y625 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
GPC6Q9Y625 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.3■□□□□ 0.52
GPC6Q9Y625 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GPC6Q9Y625 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GPC6Q9Y625 AL032819.2-201ENST00000624543 2162 ntBASIC18.3■□□□□ 0.52
GPC6Q9Y625 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GPC6Q9Y625 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
GPC6Q9Y625 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPC6Q9Y625 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.29■□□□□ 0.52
GPC6Q9Y625 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPC6Q9Y625 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.29■□□□□ 0.52
GPC6Q9Y625 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPC6Q9Y625 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.29■□□□□ 0.52
GPC6Q9Y625 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GPC6Q9Y625 HCG11-201ENST00000411553 5696 ntBASIC18.29■□□□□ 0.52
GPC6Q9Y625 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPC6Q9Y625 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
GPC6Q9Y625 AL355802.2-201ENST00000402069 882 ntBASIC18.29■□□□□ 0.52
GPC6Q9Y625 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
GPC6Q9Y625 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.29■□□□□ 0.52
GPC6Q9Y625 AC069152.1-201ENST00000438030 544 ntBASIC18.29■□□□□ 0.52
GPC6Q9Y625 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.29■□□□□ 0.52
GPC6Q9Y625 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.29■□□□□ 0.52
GPC6Q9Y625 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.29■□□□□ 0.52
GPC6Q9Y625 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.29■□□□□ 0.52
GPC6Q9Y625 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
GPC6Q9Y625 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.29■□□□□ 0.52
GPC6Q9Y625 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GPC6Q9Y625 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
GPC6Q9Y625 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPC6Q9Y625 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.29■□□□□ 0.52
GPC6Q9Y625 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPC6Q9Y625 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
GPC6Q9Y625 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPC6Q9Y625 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.29■□□□□ 0.52
GPC6Q9Y625 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC6Q9Y625 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
GPC6Q9Y625 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC6Q9Y625 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
GPC6Q9Y625 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC6Q9Y625 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC6Q9Y625 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.28■□□□□ 0.52
GPC6Q9Y625 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC6Q9Y625 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.28■□□□□ 0.52
GPC6Q9Y625 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.28■□□□□ 0.52
GPC6Q9Y625 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GPC6Q9Y625 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GPC6Q9Y625 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.28■□□□□ 0.52
GPC6Q9Y625 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC6Q9Y625 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC6Q9Y625 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC6Q9Y625 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
GPC6Q9Y625 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
GPC6Q9Y625 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC6Q9Y625 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC6Q9Y625 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC6Q9Y625 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.28■□□□□ 0.52
GPC6Q9Y625 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPC6Q9Y625 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.28■□□□□ 0.52
GPC6Q9Y625 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GPC6Q9Y625 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
GPC6Q9Y625 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
GPC6Q9Y625 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GPC6Q9Y625 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
GPC6Q9Y625 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GPC6Q9Y625 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
GPC6Q9Y625 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GPC6Q9Y625 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
GPC6Q9Y625 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
GPC6Q9Y625 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
GPC6Q9Y625 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GPC6Q9Y625 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GPC6Q9Y625 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.27■□□□□ 0.52
GPC6Q9Y625 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.27■□□□□ 0.52
GPC6Q9Y625 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.27■□□□□ 0.52
GPC6Q9Y625 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.27■□□□□ 0.52
GPC6Q9Y625 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.27■□□□□ 0.52
GPC6Q9Y625 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
GPC6Q9Y625 MYC-209ENST00000641252 345 ntBASIC18.27■□□□□ 0.52
GPC6Q9Y625 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.27■□□□□ 0.52
GPC6Q9Y625 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GPC6Q9Y625 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.27■□□□□ 0.52
GPC6Q9Y625 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.27■□□□□ 0.52
GPC6Q9Y625 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
GPC6Q9Y625 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
GPC6Q9Y625 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPC6Q9Y625 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
GPC6Q9Y625 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPC6Q9Y625 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.26■□□□□ 0.51
GPC6Q9Y625 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPC6Q9Y625 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms