Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.31■■□□□ 1
SCN10AQ9Y5Y9 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.31■■□□□ 1
SCN10AQ9Y5Y9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SCN10AQ9Y5Y9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.31■■□□□ 1
SCN10AQ9Y5Y9 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.31■■□□□ 1
SCN10AQ9Y5Y9 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 AP000523.1-201ENST00000398242 1049 ntBASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 ZNF444P1-201ENST00000559497 298 ntBASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 AC093458.2-201ENST00000623150 629 ntBASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
SCN10AQ9Y5Y9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SCN10AQ9Y5Y9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SCN10AQ9Y5Y9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.29■■□□□ 1
SCN10AQ9Y5Y9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SCN10AQ9Y5Y9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.29■■□□□ 1
SCN10AQ9Y5Y9 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SCN10AQ9Y5Y9 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SCN10AQ9Y5Y9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SCN10AQ9Y5Y9 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.29■■□□□ 1
SCN10AQ9Y5Y9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.29■■□□□ 1
SCN10AQ9Y5Y9 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.29■■□□□ 1
SCN10AQ9Y5Y9 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SCN10AQ9Y5Y9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.29■■□□□ 1
SCN10AQ9Y5Y9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SCN10AQ9Y5Y9 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SCN10AQ9Y5Y9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.28■■□□□ 1
SCN10AQ9Y5Y9 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.28■■□□□ 1
SCN10AQ9Y5Y9 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.28■■□□□ 1
SCN10AQ9Y5Y9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SCN10AQ9Y5Y9 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SCN10AQ9Y5Y9 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.28■■□□□ 1
SCN10AQ9Y5Y9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.28■■□□□ 1
SCN10AQ9Y5Y9 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.28■■□□□ 1
SCN10AQ9Y5Y9 SPDYE13P-201ENST00000445314 798 ntBASIC21.28■■□□□ 1
SCN10AQ9Y5Y9 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.28■■□□□ 1
SCN10AQ9Y5Y9 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.28■■□□□ 1
SCN10AQ9Y5Y9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.28■■□□□ 1
SCN10AQ9Y5Y9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
SCN10AQ9Y5Y9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SCN10AQ9Y5Y9 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.28■■□□□ 1
SCN10AQ9Y5Y9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.28■■□□□ 1
SCN10AQ9Y5Y9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SCN10AQ9Y5Y9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SCN10AQ9Y5Y9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SCN10AQ9Y5Y9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.27■■□□□ 1
SCN10AQ9Y5Y9 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SCN10AQ9Y5Y9 KRT126P-201ENST00000549467 1181 ntBASIC21.27■■□□□ 1
SCN10AQ9Y5Y9 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.27■■□□□ 1
SCN10AQ9Y5Y9 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.27■■□□□ 1
SCN10AQ9Y5Y9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.27■■□□□ 1
SCN10AQ9Y5Y9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SCN10AQ9Y5Y9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SCN10AQ9Y5Y9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SCN10AQ9Y5Y9 AC104417.2-201ENST00000562989 1793 ntBASIC21.27■□□□□ 0.99
SCN10AQ9Y5Y9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SCN10AQ9Y5Y9 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.27■□□□□ 0.99
SCN10AQ9Y5Y9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.27■□□□□ 0.99
SCN10AQ9Y5Y9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.27■□□□□ 0.99
SCN10AQ9Y5Y9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SCN10AQ9Y5Y9 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SCN10AQ9Y5Y9 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.26■□□□□ 0.99
SCN10AQ9Y5Y9 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCN10AQ9Y5Y9 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SCN10AQ9Y5Y9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.26■□□□□ 0.99
SCN10AQ9Y5Y9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SCN10AQ9Y5Y9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCN10AQ9Y5Y9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.26■□□□□ 0.99
SCN10AQ9Y5Y9 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.26■□□□□ 0.99
SCN10AQ9Y5Y9 AL136038.3-201ENST00000561909 1096 ntBASIC21.26■□□□□ 0.99
SCN10AQ9Y5Y9 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCN10AQ9Y5Y9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCN10AQ9Y5Y9 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.26■□□□□ 0.99
SCN10AQ9Y5Y9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SCN10AQ9Y5Y9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCN10AQ9Y5Y9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.26■□□□□ 0.99
SCN10AQ9Y5Y9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms