Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RCL1Q9Y2P8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RCL1Q9Y2P8 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RCL1Q9Y2P8 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.85■□□□□ 0.13
RCL1Q9Y2P8 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.85■□□□□ 0.13
RCL1Q9Y2P8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RCL1Q9Y2P8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.85■□□□□ 0.13
RCL1Q9Y2P8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RCL1Q9Y2P8 AC141586.3-201ENST00000562166 1838 ntBASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 CYP21A1P-202ENST00000354927 1481 ntBASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 AC019069.1-201ENST00000610008 1333 ntBASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
RCL1Q9Y2P8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
RCL1Q9Y2P8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RCL1Q9Y2P8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RCL1Q9Y2P8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
RCL1Q9Y2P8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
RCL1Q9Y2P8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RCL1Q9Y2P8 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RCL1Q9Y2P8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RCL1Q9Y2P8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
RCL1Q9Y2P8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 AL031598.1-201ENST00000561511 1773 ntBASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 PHGDH-210ENST00000641115 1638 ntBASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RCL1Q9Y2P8 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 AC096631.2-201ENST00000436136 790 ntBASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RCL1Q9Y2P8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms