Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NPIPA1Q9UND3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPIPA1Q9UND3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPIPA1Q9UND3 KRT16P6-202ENST00000425692 1426 ntBASIC17.89■□□□□ 0.45
NPIPA1Q9UND3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.89■□□□□ 0.45
NPIPA1Q9UND3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NPIPA1Q9UND3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.88■□□□□ 0.45
NPIPA1Q9UND3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
NPIPA1Q9UND3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
NPIPA1Q9UND3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
NPIPA1Q9UND3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA1Q9UND3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA1Q9UND3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA1Q9UND3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA1Q9UND3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NPIPA1Q9UND3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA1Q9UND3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.88■□□□□ 0.45
NPIPA1Q9UND3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA1Q9UND3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
NPIPA1Q9UND3 NIFKP9-201ENST00000419265 221 ntBASIC17.88■□□□□ 0.45
NPIPA1Q9UND3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.88■□□□□ 0.45
NPIPA1Q9UND3 KSR1P1-201ENST00000446298 240 ntBASIC17.88■□□□□ 0.45
NPIPA1Q9UND3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.88■□□□□ 0.45
NPIPA1Q9UND3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.88■□□□□ 0.45
NPIPA1Q9UND3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
NPIPA1Q9UND3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA1Q9UND3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA1Q9UND3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA1Q9UND3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.88■□□□□ 0.45
NPIPA1Q9UND3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA1Q9UND3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.88■□□□□ 0.45
NPIPA1Q9UND3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA1Q9UND3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.87■□□□□ 0.45
NPIPA1Q9UND3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.87■□□□□ 0.45
NPIPA1Q9UND3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA1Q9UND3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA1Q9UND3 AFG3L1P-217ENST00000557444 2447 ntBASIC17.87■□□□□ 0.45
NPIPA1Q9UND3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NPIPA1Q9UND3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NPIPA1Q9UND3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA1Q9UND3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
NPIPA1Q9UND3 RCN1P1-201ENST00000400413 996 ntBASIC17.87■□□□□ 0.45
NPIPA1Q9UND3 MIR1238-201ENST00000408483 83 ntBASIC17.87■□□□□ 0.45
NPIPA1Q9UND3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.87■□□□□ 0.45
NPIPA1Q9UND3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.87■□□□□ 0.45
NPIPA1Q9UND3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA1Q9UND3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
NPIPA1Q9UND3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
NPIPA1Q9UND3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
NPIPA1Q9UND3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA1Q9UND3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.87■□□□□ 0.45
NPIPA1Q9UND3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NPIPA1Q9UND3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA1Q9UND3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.87■□□□□ 0.45
NPIPA1Q9UND3 AC079598.2-202ENST00000546624 1451 ntBASIC17.87■□□□□ 0.45
NPIPA1Q9UND3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA1Q9UND3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
NPIPA1Q9UND3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NPIPA1Q9UND3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA1Q9UND3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 MIR6786-201ENST00000616843 113 ntBASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 KRT16P1-201ENST00000399124 1418 ntBASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 AL691432.2-201ENST00000607222 2038 ntBASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA1Q9UND3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
NPIPA1Q9UND3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
NPIPA1Q9UND3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPIPA1Q9UND3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPIPA1Q9UND3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.85■□□□□ 0.45
NPIPA1Q9UND3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NPIPA1Q9UND3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPIPA1Q9UND3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPIPA1Q9UND3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.85■□□□□ 0.45
NPIPA1Q9UND3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
NPIPA1Q9UND3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms